Fract is a Web-based fractal zoomer for the Mandelbrot set. It has no advanced features, for the goal is to keep the code easy to read for someone interested in fractals. The package also includes an offline renderer that you can use to generate high resolution images of your favorite spots. You can also easily play with the color map.
setuptools_git is a plugin for Setuptools that enables Git integration. Once installed, Setuptools can be told to include in a module distribution all the files tracked by git. This is an alternative to explicit inclusion specifications with MANIFEST.in. This package was formerly known as gitlsfiles. The name change is the result of an effort by the setuptools plugin developers to provide a uniform naming convention.
Pipviewer is a visualizer for multiple alignments of genomic sequences. It highlights conserved regions and allows basic annotations. Its main goal is to find conserved probes for the construction of gene order data sets. Selected regions marked as 'probes' can be exported to fasta format. It can also retrieve gene annotations from the NBCI and display this information along the alignment. Pipviewer is not an aligner. You must compute the alignment with another tool like Clustal or Multi PIP Maker.
This package contains Virtual Hybridization tools. Virtual Hybridization uses sets of short probes to generate datasets for comparative genomics: given a DNA sequence and a set of probes, the typical output will give a sequence of oriented probe hits along the DNA sequence. Other tools are supplied to allow simple manipulations such as format conversion and extraction of permutations.