naarani Personal Access is a Java library to run programs that need to create, design, and access a MySQL database. It features automated managment of user rights, SQL code, table updates/track, data input/user masks, and a plugin to quickly add menu/custom fields management. Table and modules (masks) can be created or updated while debugging (even inside Eclipse) without reloading the program.
StelsCSV is a JDBC driver that allows performing SQL statements and other JDBC operations upon text files (comma separated, tab-separated, fixed length, etc.). Using this driver, users can easily create a simple database consisting of plain text files. The driver can be used for writing data importing programs and migration tools. It supports most keywords of ANSI SQL92, table joins, INSERT, UPDATE, and DELETE statements, data types, aggregate, converting, string, and user-defined SQL functions.
StelsEngine is a fast in-memory SQL engine (in-memory JDBC) for storing and processing tabular data in Java applications. Using StelsEngine, you can make processing data in your software considerably easier and quicker. It implements the JDBC API standard. It is a JDBC Type 4 driver, supports most keywords of ANSI SQL 92, supports integer, floating point, string, date/time, and Java object data types, supports aggregate, numeric, string, conversion, and user-defined SQL functions, supports data loading from a DBMS, and is platform independent.
Red-Piranha is a search system that can actually learn what you are looking for. It can be used as a Web page, command line, or XML-WebService, so it will work with most languages, including Java, Perl, C#/.NET, and PHP. It includes learning abilities for the Desktop/Internet search functionality. All feedback from the user is stored in (editable) XML and RDF, and is used by the system to improve the quality of searches.
JChassis ANSI Terminal Controller is a Java API for controlling ANSI-compliant terminals and terminal emulators such a Linux virtual terminals, xterm, Gnome Terminal, and KDE Konsole. The library can be used to display character styles and colors and graphical characters in those environments. It is a repackaging of various JChassis modules into a standalone library that does not require the JChassis SDK or framework.
ProteomeCommons.org IO Framework is a proper Java framework for handling spectra and peak lists. The framework can read and write to a number of different spectra and peak list formats, and it provides a simple, intuitive Java object model for working with spectra or peak lists. All classes support two methods of handling peak list and spectrum data: in-memory or stream. The goal of this framework is to support all the popular MS and MSMS data formats, and to eliminate any time or effort involved in figuring out how to read and write peak list or spectrum files.
JChassis TermUI is an API for simple GUI-like user interfaces on ANSI/VT100-compliant terminals and terminal emulators, such as Linux virtual terminals, GNOME Terminal, and KDE Konsole. The intent is similar to that of the ncurses library, but done in pure Java. Several commonly used widgets are available.
ProteomeCommons.org Java Analysis Framework is a framework for referencing common mass spectrometry data such as atoms and residues. This framework provides a programmer with an easy-to-use library for writing programs that rely on common mass spectrometry data. The framework also contains utilities such as an isotope calculator and a reference for residue abbreviations.