LabKey Server is open source software that helps scientists manage, analyze, and share complex datasets. It supports tandem mass spectrometry, flow cytometry, assays for neutralizing antibodies, Luminex, observational studies, and secure, Web-based collaboration. The software is modular, configurable, and customizable. It can be installed in your institution on any modern hardware and operating system. It is designed to integrate with your existing systems, instruments, and work flows, and to be readily adapted by skilled programmers to novel methods of inquiry. The project is under active development by a team of professional software engineers and a community of active contributors. New versions are released about four times per year.
The cdcat is a graphical (Qt based) multi-platform catalog program that scans the directories/drives you want and memorizes the filesystem (including the tags of MP3s) and stores it in a small file. The database is stored in a gzipped XML format, so you can hack it, or use it if necessary. Cdcat can store the contents of some specified files up to a size limit if you want (for example: *.nfo).
Jaxe is a Java XML editor with a graphical document-oriented interface. It is configurable with an XML schema and a configuration file. It supports validation at element insertion, and is customisable with Java modules. XSL transforms can be used to export documents in XML, HTML, or PDF. Sample configurations include XML schemas, XHTML strict, Docbook, and DITA.
PDFreactor is a formatting processor to convert HTML and XML to PDF. It uses Cascading Style Sheets (CSS) to define page layout and styles. It allows you to dynamically generate PDF documents such as invoices, delivery notes, shipping documents, or print versions of Web content on-the-fly. Vector graphics (SVG), barcodes, MathML, XSLT, and CMYK colors are supported. All common J2EE application servers are supported. Complete .NET, PHP, Perl, Python, and Ruby APIs are included. Direct integration into automatic build processes using Apache Ant is also possible.
Genit is a framework that builds a static Web site, which does not require a server side programming language or database. Generated sites consist only of XHTML code (plus CSS and media). It runs from the command line, is based on XML, and is designed to be simple, readable, and minimalist.
Babeldoc is a framework and set of applications to process documents for business-to-business and other Internet/integration applications. It is primarily intended for text documents, especially XML, but supports a wide range of operations and data types. It has a sophisticated journaling system that supports replaying and reprocessing. Babeldoc is pipeline based and supports numerous ways to combine the pipeline stages in a dynamically reconfigurable fashion. It has a GUI and a Web-based console for document processing and monitoring, and comes with tools for the tranformation of flatfile data to XML, archival, and cryptography. Additionally it is able to scan various data sources based on sophisticated constraints.