JChassis TermUI is an API for simple GUI-like user interfaces on ANSI/VT100-compliant terminals and terminal emulators, such as Linux virtual terminals, GNOME Terminal, and KDE Konsole. The intent is similar to that of the ncurses library, but done in pure Java. Several commonly used widgets are available.
ProteomeCommons.org IO Framework is a proper Java framework for handling spectra and peak lists. The framework can read and write to a number of different spectra and peak list formats, and it provides a simple, intuitive Java object model for working with spectra or peak lists. All classes support two methods of handling peak list and spectrum data: in-memory or stream. The goal of this framework is to support all the popular MS and MSMS data formats, and to eliminate any time or effort involved in figuring out how to read and write peak list or spectrum files.
JChassis ANSI Terminal Controller is a Java API for controlling ANSI-compliant terminals and terminal emulators such a Linux virtual terminals, xterm, Gnome Terminal, and KDE Konsole. The library can be used to display character styles and colors and graphical characters in those environments. It is a repackaging of various JChassis modules into a standalone library that does not require the JChassis SDK or framework.
Panwa is a framework based on the Qt toolkit for writing platform independent applications with high quality graphical user interfaces. Panwa applications are meant as a complementary approach to Web applications, and the framework makes it possible to create applications that combine the flexibility of Web applications with the usability advantages of native applications. Therefore, you can see it as an implementation of a "rich thin client".
JSBSim is a multi-platform flight dynamics model. The FDM is essentially the physics/math model that defines the movement of an aircraft under the forces and moments applied to it using the various control mechanisms and from the forces of nature. JSBSim has no native graphics. It can be run by itself as a standalone program, taking input from a script file and various aircraft configuration files, or it can be run as an integrated part of a larger flight simulator implementation that includes a visual system. The most notable usage example is the FlightGear simulator. JSBSim models the aerodynamic forces and moments by the classic coefficient buildup method.
naarani Personal Access is a Java library to run programs that need to create, design, and access a MySQL database. It features automated managment of user rights, SQL code, table updates/track, data input/user masks, and a plugin to quickly add menu/custom fields management. Table and modules (masks) can be created or updated while debugging (even inside Eclipse) without reloading the program.
Kasai is a Java-based authentication and authorization framework. It allows you to integrate into your application a granular and manageable permission scheme. It's targeted at the specific security requirements that arise in real-life applications such as Intranets, ERPs, CRMs, document managers, accounting systems, etc.