PDB2PQR is a Python software package that automates many of the common tasks of preparing structures for continuum electrostatics calculations, providing a platform-independent utility for converting protein files in PDB format to PQR format. These tasks include adding a limited number of missing heavy atoms to biomolecular structures, determining side-chain pKas, placing missing hydrogens, optimizing the protein for favorable hydrogen bonding, assigning charge and radius parameters from a variety of force fields.
MobileMpd.Net is a small program that can be used to control a MPD (Music Player Daemon) server using a WiFi enabled Windows Mobile device. The software supports the start, stop, next, prev, repeat, and random functions, volume control, playlist addition and removal, and a music directory treeview.
phm Instant Messenger is a PHP class that can be used to manage users and friends that exchange messages. It can create and retrieve records in MySQL database tables that contain information of users, friends, and messages that they may exchange. Currently, the class implements several operations like authenticating users, changing user passwords, retrieving account password reminder questions and answers, creating user accounts, adding friends, searching for friends, retrieving user nick names, adding messages sent from one user to a friend, and retrieving messages received by a user.