jEncrypt is a commandline file encryption archiver. Files are encrypted with the AES-CTR mode, which was recommended by the National Institute of Standards and Technology in 2001 (NIST SP 800-38A). AES-CTR mode only provides confidentiality. It requires a message authentication code such as CBC-MAC to ensure an encrypted message is not accidentally modified or maliciously tampered with, which jEncrypt currently does not provide.
SQL::Yapp is a Perl module which embeds SQL completely into Perl. It checks SQL syntax at compile time and fully parses SQL to allow usage of any Perl scalars, arrays, and hashes in an intuitive and safe way. It makes SQL injections virtually impossible while making you feel as if SQL syntax were native to Perl.
Pathomx is a workflow-based tool for the analysis of metabolomic and other omics datasets. It is interactive, visual, extensible, intelligent, and free for any use. It lets you dynamically build analysis workflows using the interactive editor. Drag and drop connections between plugin tools to create a complete workflow through which to run your analysis. Data can be loaded and processed automatically, and new approaches tested simply by connecting tools.
sydep is a tool for simple deployment over rsync. In combination GIT it is very powerful instrument. It provides three actions: init, push, and pull. init creates config files for sydep in the current directory. These are sydep.cfg, which contains connection details, and .sydepignore, which specifies files to ignore. push uploads files from the working directory to the server. pull downloads existing files from the server. It downloads only those files which are already in the working directory.