db4o is an object database for Java and all .NET environments. Its features include ACID transactions, automatic class schema recognition, query-by-example, a S.O.D.A. object querying API, native queries, LINQ support on .NET, callback methods, memory files, cascade-on-delete, multi-threaded access, and Java Webstart and servlet support.
Piccolo2D is a toolkit that supports the development of 2D structured graphics programs, in general, and Zoomable User Interfaces (ZUIs), in particular. A ZUI is a new kind of interface that presents a huge canvas of information on a traditional computer display by letting the user smoothly zoom in to get more detailed information and zoom out for an overview. It uses a "scene-graph" model that is common to 3D environments. This means that Piccolo maintains a hierarchical structure of objects and cameras.
SuperWaba is a VM for PDAs. Because of the way it was written, you can use Java to develop programs for it. It supports exceptions, threads, many user interface controls, double and long 64-bit types, grayscale, color, 3D controls, and JNI and Java libraries, among other features. The project has been superseded and replaced with TotalCross.
ProteomeCommons.org IO Framework is a proper Java framework for handling spectra and peak lists. The framework can read and write to a number of different spectra and peak list formats, and it provides a simple, intuitive Java object model for working with spectra or peak lists. All classes support two methods of handling peak list and spectrum data: in-memory or stream. The goal of this framework is to support all the popular MS and MSMS data formats, and to eliminate any time or effort involved in figuring out how to read and write peak list or spectrum files.
JChassis ANSI Terminal Controller is a Java API for controlling ANSI-compliant terminals and terminal emulators such a Linux virtual terminals, xterm, Gnome Terminal, and KDE Konsole. The library can be used to display character styles and colors and graphical characters in those environments. It is a repackaging of various JChassis modules into a standalone library that does not require the JChassis SDK or framework.
Light-Weight Visual Components Library (LwVCL) is a powerful, small, fast, efficient, framework of visual components that provides a rich set of customizable, flexible user interface components. There are versions for J2SE/J2ME Personal Profile, J2ME MIDP, .NET, and SWT. This provides a unified GUI framework for different platforms that provides the same API, the same concepts, and the same look and feel.