MetaPath is a tool for the analysis of metabolic pathways and associated visualization of experimental data. Built on the MetaCyc database, it provides an interactive map in which multiple pathways can be simultaneously visualized. Multiple annotations from the MetaCyc database are available, including synonyms, associated reactions and pathways, and database unification links. Metabolomics change data can be imported via simple CSV formats for visualization on targeted pathways. Pathways can be mined and removed algorithmically to identify key regulated pathways within a given dataset, providing a simper route to metabolic functions.
QMentat helps you practice mental arithmetic. It uses arbitrary-length fixed point arithmetic, and can handle any size numbers, only limited by the size of your screen (and in the case of division with an integer result, the speed at which the number can be factored). It is also quite configurable, allowing you to tailor the questions to your needs.
omnisode generates a Ruby program to use long Taylor series to solve systems of ordinary differential equations. It generates code to solve the equations in either Maple or Maxima. Using the Taylor series, estimates are made of the location and order of poles. It has been greatly re-worked the last few years, and tested quite a bit recently. Support may be extended to other languages in the future.
Dr. Geo is an interactive geometry program that is distributed as a universal portable application. It allows one to create a geometric sketch and manipulate it according to its constraints. It is usable at home or at school, in primary or secondary education. It is simple and effective with extended features including scripting and programming.
Xtreme Download Manager is a advanced and powerful tool to increase download speed up to 500%, resume broken/dead downloads, capture FLV videos from any site, and schedule downloads. It uses a sophisticated dynamic segmentation algorithm, data compression, and connection reuse to speed up the download process. It supports HTTP, HTTPS, and FTP protocols, firewalls, proxy servers, file redirects, cookies, authorization, etc. It seamlessly integrates with Firefox on any operating system. It also integrates with any other browser to handle downloads automatically using advanced browser integration. It is entirely written in Java, so it runs on any operating system without even being installed.
check_nwc_health is a plugin for the Shinken (or Nagios/Icinga) monitoring system. It is used to check hardware health, environment, interfaces, pools, uptime, etc. of a great range of the most popular network components like switches, routers, firewalls, proxies, load balancers, etc. Currently it can monitor: Cisco IOS, Cisco Nexus, F5 BIG-IP, CheckPoint Firewall1, Juniper NetScreen, HP Procurve, Nortel, Brocade 4100/4900, EMC DS 4700, EMC DS 24, Allied Telesyn, and Blue Coat SG600.
Netzob supports the expert in reverse engineering, evaluation, and simulation of communication protocols. Its main goals are to help security evaluators to assess the robustness of proprietary or unknown protocol implementations, simulate realistic communications to test third-party products (IDS, firewalls, etc.), and create an Open Source implementation of a proprietary or unknown protocol. Netzob provides a semi-automatic inferring process, and includes everything necessary to passively learn the vocabulary of a protocol and actively infer its grammar. The learnt protocol can afterward be simulated. Netzob handles text protocols (like HTTP and IRC), fixed field protocols (like IP and TCP), and variable field protocols (like ASN.1-based formats).