The NCBI C++ Toolkit provides portable libraries and applications for assisting genetic science. These include libraries for networking, SQL and BerkeleyDB access, CGI and HTML handling, ASN.1 and XML handling, sequence alignment engines, sequence retrieval engines, BLAST database engines, FLTK and OpenGL graphics toolkits, and basic system utilities.
ServingXML is a markup language for expressing XML pipelines and an extensible Java framework for defining the elements of the language. It defines a vocabulary for expressing flat-XML, XML-flat, flat-flat, and XML-XML transformations in pipelines. The accompanying console app supports reading content as XML files, flat files, SQL queries, or SAX events, and writing it as XML, HTML, PDF, or mail attachments. This software is especially suited for converting flat file or database records to XML, with its support for namespaces, variant record types, multi-valued fields, segments and repeating groups, hierarchical grouping of records, and row-by-row validation with XML Schema. There is also an API for embedding the software in a Java application.
phpFaber CMS is a Web-based content management system that fully supports MySQL. phpFaber CMS separates content from code and allows your organization to focus on content. The code, layout, and graphics are consistent through every single page of your site. phpFaber CMS (bundle edition) includes the CMS engine and modules for articles, banner ads, bookmarks, downloads, FAQs, feedback, GeoIP, Google sitemaps, links, news, newsletters, polls, recommendations, searching, and user management.
First Choice to HTML converts PFS:First Choice database files to HTML. It features full explanation of the conversions, examples, CGI routines, and a full set of links to resources. Several other utilities are included, such as tools for analyzing, sorting, rearranging, and pretty printing.
Schroedinger is the combination of Apache Tomcat with a nice, clean Swing GUI. It provides an easy way to create and test JSP and Servlet Web applications. It records every JSP/HTTP activity so that every possible bug can be corrected immediately. Schroedinger can be used in personal mode, which prevents others from using its JSP Server while you develop the application. Alternatively, Schroedinger's working directory can be opened via file-sharing, so that a JSP can be copied to any computer of the JSP development team.
FramerD is a semi-structured object database integrated with a Scheme-based scripting language which supports multi-lingual programming (with pervasive Unicode), a stable module system for programming in the large, distributed applications (via an extensible RPC protocol), non-deterministic (PROLOG-like) evaluation for search and set operations, multi-threaded program execution, extensive tools for text and language analysis, built-in HTML/XML/MIME parsers, and intuitive (CGI- and FastCGI-based) Web scripting. The built-in object database robustly supports millions of objects and indexed access to those objects, both through disk files and networked servers.
RADpage is a rapid application development system for dynamic, data-driven Web applications. It directly operates inside the browser without requiring a client-dependent development environment. RADpage comes as an Apache module or a CGI, includes a powerful HTML/XML like object-oriented programming language called heitml (pronounced "Hi-TML"), and more than 150 Web application components. Development is done on a fully functional application instead of requiring the edit-save-browse cycle associated with conventional client-side development environments. The RADpage editor stores application pages in readable well-formed XML or upon request in HTML for editing with HTML editors.