Visual Paradigm for UML is a Unified Modeling Language (UML) design tool that supports all UML diagrams, SysML diagrams, and entity relationship diagrams. Visual Paradigm for UML provides extensive use case modeling features, including full function UML use case diagram, flow of events editor, use case/actor grid, and activity diagram generation. Visual Paradigm for UML produces system documentation in PDF, HTML, and MS Word formats. A developer can design system documentation with the template designer. A system analyst can estimate the consequences of changes with impact analysis diagrams, such as matrix and analysis diagram. Visual Paradigm for UML generates Java code.
Jmol is a Free, Open Source molecule viewer and editor. It is a collaboratively developed visualization and measurement tool for chemical scientists. Jmol is an active project, and there are new features being added to it on a daily basis. Users are encouraged to modify it to fit their needs and to contribute their changes to the project.
RapidMiner (formerly YALE) is a flexible Java environment for knowledge discovery in databases, machine learning, and data mining. Many nestable learning and preprocessing operators (including Weka) are provided. It features an XML-based graphical user interface, a plugin mechanism, and high-dimensional plotting, and provides an easy-to-use extension mechanism that makes it possible to integrate new operators and adapt the system to your personal requirements. A command line version is also included.
The Chemistry Development Kit (CDK) is a library of Java classes for chemo-, bioinformatics, computational chemistry, and chemometrics. It provides important algorithms like substructure search, SMILES, Gasteiger charges, QSAR descriptor calculation, 3D structure generation, 2D layout and rendering, many IO formats, atom typing, and more.
Jacksum is a platform-independent utility for computing and verifying checksums, CRCs, and message digests, as well as timestamps of files. It supports most common checksum algorithms. The format of the output is fully customizable. The program is large-file-aware, and recursive file processing as well as platform-independent file verification are supported.
Collaba is a multimedia collaboration and communication server built to provide digital workspaces to virtual educational, corporate, and other communities. It features secure email (Web, POP3/SMTP, crypto, and anti-spam), online forums (Web, RSS, NNTP, and podcast), blogs (Web, RSS, podcast), multimedia chat (text, multimedia panel, etc.), personal and group calendering, address books, bookmarks, an online Web page editor, file services and CMS (Web, WebDAV, FTP, SMB, CIFS, anvi-virus API, and ClamAV support), digital portfolio, dynamic news board, directory access, support for multiple independent communities on one server, Single-Sign-On features (built-in support for LDAP, CAS 2.0, JAAS, SMTP-Auth and more, powerful developer API), full online server management, anti-spam (RBL and filters), anti-virus support, centralized management with LDAP directories, Web publishing of personal, group or general web sites, developer APIs, and much more.
SDE for NetBeans is a UML modeling environment tightly integrated with NetBeans. It lets you draw all types of UML diagrams (use case diagram, class diagram, sequence diagram, activity diagram, etc.) in NetBeans, reverse source code (Java, C++, XML, XML Schema, CORBA IDL, etc.) to UML models, and generate Java source from UML diagrams. It features a Rational Rose importer, an XMI importer, HTML/PDF documentation generators, and plug-in and template support.
ASCIIMathML is a script that converts calculator-style ASCII math notation (and many LaTeX formulas) to Presentation MathML while your Web page loads. It works with HTML and XHTML files in Mozilla/Firefox/Netscape 7+ browsers, as well as in Internet Explorer 6 with MathPlayer. For example, the solutions for the equation 'ax^2+bx+c=0' are expressed in the HTML file as '(-b +- sqrt(b^2 - 4ac))/(2a)', and display as nicely formatted MathML. The script can be easily used in wikiservers and blogs, as a rudimentary MathML editor (with instant preview), and to preview math formulas as they are typed into a Web page input area.
Yacas is a general purpose, easy to use Computer Algebra System (a CAS is a program that can be used to do symbolic manipulation of mathematical expressions). It is built on top of its own programming language designed for this purpose, in which new algorithms can easily be implemented. In addition, it comes with extensive documentation on the functionality implemented and methods used to implement them.