cgrep provides many of the features of grep, egrep, and fgrep with enhanced performance along with many additional features. One of the most important features is the ability to output the context (surrounding lines) of the matching lines. The context window may be specified as a constant number of lines before and after the matching lines, by specifying beginning and ending delimiters, or various combinations thereof.
ProteomeCommons.org IO Framework is a proper Java framework for handling spectra and peak lists. The framework can read and write to a number of different spectra and peak list formats, and it provides a simple, intuitive Java object model for working with spectra or peak lists. All classes support two methods of handling peak list and spectrum data: in-memory or stream. The goal of this framework is to support all the popular MS and MSMS data formats, and to eliminate any time or effort involved in figuring out how to read and write peak list or spectrum files.
JSBSim is a multi-platform flight dynamics model. The FDM is essentially the physics/math model that defines the movement of an aircraft under the forces and moments applied to it using the various control mechanisms and from the forces of nature. JSBSim has no native graphics. It can be run by itself as a standalone program, taking input from a script file and various aircraft configuration files, or it can be run as an integrated part of a larger flight simulator implementation that includes a visual system. The most notable usage example is the FlightGear simulator. JSBSim models the aerodynamic forces and moments by the classic coefficient buildup method.
TacitPixel (formerly libTAP ) is a prototyping system for virtual reality and augmented reality applications. It runs on a variety of platforms. RAP (rapid application prototyping) is done through the Lua interface, which mirrors the C++ namespace as closely as possible. libTAP has a small but distinctive feature set, focused on prototyping of realtime 3D simulations.
Mrxvt (previously known as materm) is a multi-tab X terminal emulator based on rxvt/aterm. It supports multiple tabs, runtime dynamic tab title, pseudo-transparent backgrounds, user-supplied background images (JPEG, PNG, or XPM), background color tinting, text shadows, NeXT/rxvt/xterm/SGI style scrollbars, XIM, multiple languages (Chinese, Korean, and Japanese) and logging. It is lightweight and fast, and only depends on Xlib.
Bandwidth Monitor NG is a small console-based live network and disk I/O bandwidth monitor for Linux, BSD, Solaris, Mac OS X, and others. It supports /proc/net/dev, netstat, getifaddr, sysctl, kstat, /proc/diskstats, /proc/partitions, IOKit, devstat, and libstatgrab. An unlimited number of interfaces and disks are supported. Interfaces and disks are added or removed dynamically from the list. You can white or blacklist interfaces and disks. The output includes KB/s, Kb/s, packets, errors, average, max, and total sum, and can be viewed via curses, a plain console, CSV, or HTML. Configuration can be done through a config file or the command line.
nMicrocoder is an ncurses EDA tool to write microcode. Basically, it is a stripped down spreadsheet program that lets you fill a table with "0", "1", and "-", and gives you compile-ready verilog code in return. It was written as an alternative to full spreadsheet programs. It is known to run on Linux, IRIX, and Solaris, unless ncurses 5.3 is installed.
VisIt is an interactive parallel visualization and graphical analysis tool for viewing scientific data. Users can quickly generate visualizations from their data, animate them through time, manipulate them, and save the resulting images for presentations. VisIt contains a rich set of visualization features so that you can view your data in a variety of ways. It can be used to visualize scalar and vector fields defined on two- and three-dimensional (2D and 3D) structured and unstructured meshes. It was designed to interactively handle very large data set sizes in the terascale range, and works well down to small data sets in the kilobyte range.
libGlass is a scalable set of components that can be used by applications to perform distributed computing. Applications are built by reusing the available components as needed. One of the major goals of Glass is to be a user-friendly framework, not only suitable for new applications, but also for legacy code. This is an important feature, as most available solutions for distributed computing require a substantial amount of rewrite of legacy code.