ProteomeCommons.org IO Framework is a proper Java framework for handling spectra and peak lists. The framework can read and write to a number of different spectra and peak list formats, and it provides a simple, intuitive Java object model for working with spectra or peak lists. All classes support two methods of handling peak list and spectrum data: in-memory or stream. The goal of this framework is to support all the popular MS and MSMS data formats, and to eliminate any time or effort involved in figuring out how to read and write peak list or spectrum files.
BioCoRE is a collaborative work environment for biomedical research, research management, and training. It features easy-to-use tools, among them co-authoring papers and other documents, running applications on supercomputers, sharing molecular visualization over the Internet, notifying project team members of recent project changes by email, chatting, keeping a lab book, and other practical features.
RoadMap is a navigation program for Unix and PocketPC that displays street maps. Most of the maps are provided by the US Census Bureau, and thus only the US has a decent coverage at this time. A specific area can be displayed by entering a street address (street number, street name, city, and state). It interfaces with a GPS receiver through gpsd or the serial line to track the car position. It has been designed to be usable on a Linux desktop or laptop computer, or on a PDA (Linux or PocketPC).