Erudite is an application for training and testing back propogation neural networks using the ANNeML (Artifical Neural Network Markup Language) XML format. It supports testing and training neural nets with CSV files and has support for randomized training sets, optional adapting learning rate, sigmoid or hyperbolic tangent transfer functions, optional bias and weight adjustment locking, and more.
Open Grid Scheduler/Grid Engine is a batch-queuing system for distributed resource management. It is used by many high-performance clusters and computation farms. Together with basic batch job scheduling, it supports advance reservation, array jobs, parallel make, parallel job management, and GPU management.
Son of Grid Engine is a highly-scalable and versatile distributed resource manager for scheduling batch or interactive jobs on clusters or desktop farms. It is a community project to continue Sun's Grid Engine. It is competitive against proprietary systems and provides better scheduling features and scalability than other free DRMs like Torque, SLURM, Condor, and Lava.
GRAL is a library for creating high quality plots and charts in Java. Many plot types are available like scatter plot, bubble plots, line plots, area plots, pie charts, and bar charts. Additionally, GRAL can exchange and process data (smoothing), and various plug-ins allow the import and export of data and graphics to formats like CSV, JPEG, PNG, EPS, PDF, or SVG.
iLAP (Laboratory data management, Analysis, and Protocol development) is a workflow-driven information management system specifically designed to create and manage experimental protocols and to analyze and share laboratory data. The system combines experimental protocol development, wizard-based data acquisition, and high-throughput data analysis into a single, integrated system.
jblas is a fast linear algebra library for Java. It is based on BLAS and LAPACK, the de-facto industry standard for matrix computations, and uses state-of-the-art implementations like ATLAS for all its computational routines, making it very fast. It is essentially a lightweight wrapper around the BLAS and LAPACK routines. These packages originated in the Fortran community, which explains their archaic API. On the other hand, modern implementations are hard to beat performance-wise. jblas aims to make this functionality available to Java programmers such that they do not have to worry about writing JNI interfaces and calling conventions of Fortran code.
JAME is an application for creating fractals and other graphics artifacts. It is written in the Java language, with some native code to accelerate encoding of videos and images. It has a real-time, multi-threaded graphics engine with layers, filters, effects, a lot of formulas, and parameters. JAME supports operations such as continuous zoom of Mandelbrot and Julia sets, rotation, and color shifting. JAME has also advanced features such as networked computation and scripting. You can take photos of your fractals or record movies from your exploration paths. Photos and movies are stored in a database to be rendered in high resolution and exported to a file. JAME can be extended by plug-ins which provide fractals, formulas, filters, effects, and more.