The NCBI C++ Toolkit provides portable libraries and applications for assisting genetic science. These include libraries for networking, SQL and BerkeleyDB access, CGI and HTML handling, ASN.1 and XML handling, sequence alignment engines, sequence retrieval engines, BLAST database engines, FLTK and OpenGL graphics toolkits, and basic system utilities.
VectorSpace Database (VSDB) provides multi-dimensional similarity search capability in a robust server package. It is a server that allows any socket-capable programming language to post and search vectorspaces of multi-dimensional data. Data can be of any base datatype (e.g. text, objects, dating profiles, sessions, ecommerce orders, etc.). VSDB also offers a clustering capability that can display groupings of data based on common dimensions. A built-in thesaurus feature can help bridge multiple-similar-dimensions in search or clustering.
nexB OpenAssets is a tool for inventorying, managing, and monitoring applications, software, hardware, networks, and generally any IT asset. It is designed so that system administrators, IT, and finance can determine what they have, how it is configured, what it is used for, and how much it is being used, so that informed decisions can be made. It complements existing network management software, integrates with a growing number of protocols and tools, and features no-agent discovery and inventory, configuration management including dependencies and correlation, monitoring, and reporting. It makes extensive and innovative use of XML, Xpath, and Xquery.
FramerD is a semi-structured object database integrated with a Scheme-based scripting language which supports multi-lingual programming (with pervasive Unicode), a stable module system for programming in the large, distributed applications (via an extensible RPC protocol), non-deterministic (PROLOG-like) evaluation for search and set operations, multi-threaded program execution, extensive tools for text and language analysis, built-in HTML/XML/MIME parsers, and intuitive (CGI- and FastCGI-based) Web scripting. The built-in object database robustly supports millions of objects and indexed access to those objects, both through disk files and networked servers.
Emdros is a corpus query system for storing and searching linguistically annotated text. It is very generic, supporting almost any kind of annotation from almost any linguistic theory. All linguistic levels of analysis are supported, including phonology, morphology, the lexical level, syntax, and discourse. The core libraries act as a middleware layer between a client and an underlying SQL database. MySQL, PostgreSQL, and SQLite are supported.
Permission Record Information Machine (PRIM) delivers database connectivity via a web browser. Users can have different database permissions (e.g. create tables, modify tables, etc.). PRIM has built-in database analytical tools such as graph displays, reporting, etc. English and Chinese (Big5) language support.
X-Hive/DB is a powerful native XML database designed for software developers who require advanced XML data processing and storage functionality within their applications. The comprehensive X-Hive/DB Java API contains methods for storing, querying, retrieving, transforming, and publishing XML data. X-Hive/DB supports all major W3C standards, such as XQuery, XPath, DOM, XPointer, XML Schemas, and more.
Net::Z3950::SimpleServer is a Perl module which implements the server side of the Z39.50 (information retrieval) protocol. It hides the complexity of network exchanges, packet serialization, and session handling. You are required only to implement simple callbacks to support searching and record retrieval. It is the basis of the "Zoogle" project, which is a Z39.50 gateway to the Google web index.
Ciao is a complete Prolog system subsuming ISO-Prolog with a novel modular design which allows both restricting and extending the language. Ciao extensions currently include feature terms (records), higher-order, functions, constraints, objects, persistent predicates, a good base for distributed execution (agents), and concurrency. Libraries also support WWW programming, sockets, and external interfaces (C, Java, TCL/Tk, relational databases, etc.). An Emacs-based environment, a stand-alone compiler, and a toplevel shell are also provided.