Baudline is a time-frequency browser designed for scientific visualization of the spectral domain. Signal analysis is performed by Fourier, correlation, and raster transforms that create colorful spectrograms with vibrant detail. Conduct test and measurement experiments with the built in function generator, or play back audio files with a multitude of effects and filters. The baudline signal analyzer combines fast digital signal processing, versatile high speed displays, and continuous capture tools for hunting down and studying elusive signal characteristics.
BioJava aims to provide a comprehensive set of Java components for the rapid development of applications in Bioinformatics. It contains interfaces for representing Sequences, Features, and other important bioinformatics concepts. It can also read and write sequence data in a variety of common formats and communicate with Ensembl databases and with DAS and BioCorba servers.
The Bubbling Load Monitor (or "Bubblemon" for short) is a system load monitor for the GNOME panel. It looks like a vial containing water. The water level indicates how much (electronic) memory is in use. The color of the liquid indicates how much swap space is used. The amount of bubbles reflects the system CPU load. A message in a bottle indicates there is unread mail. A reed-like graph shows I/O load. On multi-core systems the CPU with the highest load will bubble in the middle, and the others on the sides, so it's possible to see how well load gets distributed between CPUs.
Coin is an implementation of Open Inventor. Open Inventor is the de facto standard API for retained-mode 3D graphics programming. Open Inventor has a highly extensible design, and has been designed to allow for rapid development of highly interactive 3D graphics applications in the fields of CAD, engineering, scientific computing, simulation, VRML, and visualization.
DINO is a realtime visualization program for structural biology data, including protein and nucleic-acid coordinates, molecular surfaces, electrostatic potentials, electron densities, surface topographs (from AFM), and MD trajectories. It supports PNG, PostScript and POVray (3.1g and megapov) output. Supported platforms are Linux/i386, Linux/PPC, IRIX, Sun, OSF1, and MacOS X.
EGO is a program to perform molecular dynamics simulations on parallel as well as on sequential computers. Supported parallel machines include the Hitachi SR8000, CRAY-T3E, IBM-SP2, Fujitsu VPP700, Parsytec-CC under PARIX, and inhomogeneous clusters of UNIX workstations under PVM or MPI. EGO also runs sequentially on any decent UNIX workstation, even Windows95/NT PC's (with a GNU-C compiler) can be used.