12 projects tagged "Scientific software"
Racket (formerly PLT Scheme) is a programming language suitable for implementation tasks ranging from scripting to application development, including GUIs, Web services, etc. It includes the DrRacket programming environment, a virtual machine with a just-in-time compiler, tools for creating stand-alone executables, the Racket Web server, extensive libraries, documentation for both beginners and experts, and more. It supports the creation of new programming languages through a rich, expressive syntax system. Example languages include Typed Racket, ACL2, FrTime, and Lazy Racket.
StarORF is a tool that facilitates the identification of the protein(s) encoded in DNA sequences and allows for transforming input sequence in its reverse complements. It allows students to define the minimal ORF length detected and highlighted by the software. Students can see putative ORF protein sequence (longer than specified ORF length), visualize start and stop codons in the sequence, and navigate imported sequences. The StarORF site contains a software user manual, video tutorial, and exercises applicable to high school and college classrooms.
GraphInsight is visualization software that lets you explore graph data through high quality interactive representations. Data exploration and knowledge extraction from graphs is of great interest nowadays: knowledge is disseminated in social networks, and services are powered by cloud computing platforms. Data miners deal with graphs every day. Humans are extremely good at identifying patterns and outliers. Interacting visually with your data can give you better intuition and higher confidence in what you are looking for.
FLENS is short for Flexible Library for Efficient Numerical Solutions. This C++ can be used as a builing block for the implementation of other (higher-level) numerical libraries or numerical applications. It is a C++ library (requires a C++11 conform compiler). Easy install, as FLENS is headers only. It gives you Matrix/vector types for dense linear algebra; a generic (i.e. templated) implementation of BLAS; and a generic reimplementation of LAPACK. If high performance BLAS libraries like ATLAS, GotoBLAS, etc. are available, you simply can link against them and boost performance.
GriF is a collaborative grid framework to support computational chemistry applications. It is meant to be used as a tool to facilitate massive grid calculations and also to improve scientific collaboration. Accordingly, GriF facilitates profiling the users of grid communities in order to systematically evaluate the work carried out in a grid and to foster its sustainability.
SourceAFIS is a fingerprint recognition/matching SDK (library), or more generally an Automated Fingerprint Identification System (AFIS). It essentially compares two fingerprints and decides whether they belong to the same person. It can quickly search a large database of registered fingerprints. It comes with an easy-to-use API (pure .NET and Java) plus assorted applications and tools.