StarORF is a tool that facilitates the identification of the protein(s) encoded in DNA sequences and allows for transforming input sequence in its reverse complements. It allows students to define the minimal ORF length detected and highlighted by the software. Students can see putative ORF protein sequence (longer than specified ORF length), visualize start and stop codons in the sequence, and navigate imported sequences. The StarORF site contains a software user manual, video tutorial, and exercises applicable to high school and college classrooms.
GraphInsight is visualization software that lets you explore graph data through high quality interactive representations. Data exploration and knowledge extraction from graphs is of great interest nowadays: knowledge is disseminated in social networks, and services are powered by cloud computing platforms. Data miners deal with graphs every day. Humans are extremely good at identifying patterns and outliers. Interacting visually with your data can give you better intuition and higher confidence in what you are looking for.
Kelvin is a units converter intended for scientists, teachers, and students who need a reliable tool for fast conversion. Some categories included are: acceleration, area, frequency, atomic physics, density, electrical capacitance, electromagnetic radiation, energy/work, flow, force, fuel consumption, illumination, length, luminance, luminous flux, magnetomotive force, mass, power, prefixes and suffixes, pressure and stress, specific heat, speed/velocity, temperature, thermal resistance, time, torque, viscosity (dynamic), viscosity (kinematic), volume, and dry/liquid capacity.
Thinknowlogy is grammar-based software, designed to utilize the Natural Laws of Intelligence in grammar, in order to create intelligence through natural language in software. This is demonstrated by programming in natural language, reasoning in natural language and drawing conclusions (more detailed than scientific solutions), making assumptions (with self-adjusting level of uncertainty), asking questions (about gaps in the knowledge), and detecting conflicts in the knowledge. It builds semantics autonomously (with no vocabularies or words lists), detecting some cases of semantic ambiguity. It is multi-grammar, proving that Natural Laws of Intelligence are universal.
HEALPix is a set of scientific tools implementing the Hierarchical Equal Area isoLatitude Pixelation of the sphere. As suggested in the name, this pixelation produces a subdivision of a spherical surface in which every single pixel covers the same surface area. HEALPix provides various programs and libraries in C, C++, Fortran, GDL/IDL, Java, and Python which facilitate discretization, simulation, processing, analysis, and visualization of data on the sphere up to very high resolution. It is the state-of-the-art program used in astronomy and cosmology to deal with massive full-sky data sets.
FLENS is short for Flexible Library for Efficient Numerical Solutions. This C++ can be used as a builing block for the implementation of other (higher-level) numerical libraries or numerical applications. It is a C++ library (requires a C++11 conform compiler). Easy install, as FLENS is headers only. It gives you Matrix/vector types for dense linear algebra; a generic (i.e. templated) implementation of BLAS; and a generic reimplementation of LAPACK. If high performance BLAS libraries like ATLAS, GotoBLAS, etc. are available, you simply can link against them and boost performance.
KaHIP - Karlsruhe High Quality Partitioning - is a family of graph partitioning programs that tackle the balanced graph partitioning problem. It focuses on solution quality and implements flow-based methods, more-localized local searches, and several parallel and sequential meta-heuristics.