RSS 6 projects tagged "Scientific Computing"

No download Website Updated 03 Jun 2009 Crux

Screenshot
Pop 13.60
Vit 1.00

Crux is a software toolkit for a molecular phylogenetic inference. It is structured as a set of Python modules, which makes it possible to quickly develop Python scripts that perform unique, non-canned analyses.

Download Website Updated 14 Dec 2010 StarCluster

Screenshot
Pop 83.62
Vit 2.04

StarCluster is a utility for creating traditional computing clusters used in research labs or for general distributed computing applications on Amazon's Elastic Compute Cloud (EC2). It uses a simple configuration file provided by the user to request cloud resources from Amazon and to automatically configure them with a queuing system, an NFS shared /home directory, passwordless SSH, OpenMPI, and ~140GB scratch disk space. It consists of a Python library and a simple command line interface to the library. For end-users, the command line interface provides simple intuitive options for getting started with distributed computing on EC2 (i.e. starting/stopping clusters, managing AMIs, etc). For developers, the library wraps the EC2 API to provide a simplified interface for launching/terminating nodes, executing commands on the nodes, copying files to/from the nodes, etc.

No download Website Updated 20 Dec 2009 GarlicSim

Screenshot
Pop 30.98
Vit 40.18

GarlicSim is a platform for writing, running, and analyzing simulations. It is general enough to handle any kind of simulation: physics, game theory, epidemic spread, electronics, etc. GarlicSim aims to eliminate the need to write any boilerplate code that isn't directly related to the phenomenon you're simulating. GarlicSim defines a new format for simulations, called a simulation package and often abbreviated as simpack. The simpack contains all the code that define the simulated system, and is simply a Python package which defines a few special functions according to the GarlicSim simpack API. Simpack code may also be written in C. All of the tools that GarlicSim provides can be used to run simulations of all kinds of different domains.

Download Website Updated 18 Mar 2011 Feel++

Screenshot
Pop 34.99
Vit 1.00

Feel++ (formerly known as Life) is a C++ library for solving partial differential equations using generalized Galerkin methods: fem, hp/fem, and spectral methods.

No download Website Updated 07 Jun 2011 Sempy

Screenshot
Pop 11.92
Vit 32.37

Sempy is a software implementation of the spectral element method for the solution of heat transfer and fluid flow problems.

Download Website Updated 06 Jun 2013 Pegasus WMS

Screenshot
Pop 44.73
Vit 1.63

The Pegasus Workflow Management System encompasses a set of technologies which help workflow-based applications execute in a number of different environments, including desktops, campus clusters, grids, and clouds. It bridges the scientific domain and the execution environment by automatically mapping high-level workflow descriptions onto distributed resources. It automatically locates the necessary input data and computational resources necessary for workflow execution. It enables scientists to construct workflows in abstract terms without worrying about the details of the underlying execution environment or the particulars of the low-level specifications required by the middleware (Condor, Globus, or Amazon EC2). It bridges the current cyberinfrastructure by effectively coordinating multiple distributed resources.

Screenshot

Project Spotlight

Grenouille

An online service for weather data.

Screenshot

Project Spotlight

4MLinux

A miniature Linux distribution.