Voreen is a rapid application development framework for the interactive visualization and analysis of multi-modal volumetric data sets. It provides GPU-based volume rendering and data analysis techniques and offers high flexibility when developing new analysis workflows in collaboration with domain experts. The Voreen framework consists of a multi-platform C++ library, which can be easily integrated into existing applications, and a Qt-based stand-alone application.
GoFigure2 is a cross-platform application for visualization, processing, and analysis of out-of-core multidimensional microscopy data (5D data sets). Users can visualize images, segment cells in 3d, track cells through time, and detect cell divisions to generate lineages. Results are stored in a MySQL database back-end. Once data has been processed, cell-based object features are quantified and can be used for sorting, color-coding, analysis, or exported to external tools. GoFigure2 was developed for biology research including studying the development of embryos (zebrafish and mouse), synthetic biology (signaling), and for drug screening.
Opticks is similar to commercial tools like ERDAS IMAGINE, RemoteView, ENVI, or SOCET GXP. Unlike other competing tools, you can add capability to Opticks by creating extensions. It supports the following file formats: NITF 2.0/2.1, GeoTIFF, ENVI, ASPAM/PAR, CGM, DTED, Generic RAW, ESRI Shapefile, HDF5, AVI, MPEG, JPEG, GIF, PNG, and BMP. It can zoom, pan, or rotate spatially large datasets. It can quickly layer GIS features, annotations, results, and other information over your data to provide context. It has many image display controls such as colormap, histogram, transparency, etc. Support for datasets larger than four gigabytes. Analysts can quickly combine steps using graphical wizards. Support for processing data in its native interleave of BIP, BSQ, or BIL. Extensions can add new processing algorithms, file formats, visualizations of the data, or data types.
GPlates offers a novel combination of interactive plate-tectonic reconstructions, geographic information system (GIS) functionality, and raster data visualization. GPlates enables both the visualization and the manipulation of plate-tectonic reconstructions and associated geological, geophysical, and paleo-geographic data through geological time.
Opticks Extras is a set of official extensions for the Opticks application. The Spectral Processing extension adds multi-spectral and hyper-spectral processing capability to Opticks. The IDL Scripting extension integrates an IDL interpreter directly into the Opticks application. The Python Scripting Extension integrates a Python interpreter directly into the Opticks application.
The Image-Guided Surgery Toolkit is a high-level, component-based framework that provides common functionality for image-guided surgery applications. The framework is a set of high-level components integrated with low-level open source software libraries and application programming interfaces (API) from hardware vendors. IGSTK provides, among other things, the ability to read and display medical images, an interface to common tracking hardware, and GUI and visualization capabilities.
Kst is a fast real-time large-dataset viewing and plotting tool with built-in data analysis functionality. It contains many powerful built-in features and is expandable with plugins and extensions. It features powerful keyboard and mouse plot manipulation, a large selection of built-in plotting and data manipulation functions (such as histograms, equations, and power spectra), built-in filtering and curve fitting capabilities, a convenient command-line interface, a powerful graphical user interface with non-modal dialogs for an optimized workflow, support for several popular data formats, extended annotation objects similar to vector graphics applications, and high-quality export to bitmap or vector formats,