Jmol is a Free, Open Source molecule viewer and editor. It is a collaboratively developed visualization and measurement tool for chemical scientists. Jmol is an active project, and there are new features being added to it on a daily basis. Users are encouraged to modify it to fit their needs and to contribute their changes to the project.
MayaVi is a free, cross platform, easy-to-use scientific data visualizer. It provides a powerful GUI to ease the visualization process. It is written in Python and uses the Visualization Toolkit (VTK) for the graphics. MayaVi can be scripted from other Python programs and also from the interactive Python interpreter. MayaVi includes the VTK Pipeline browser. The VTK Pipeline browser is a Python module (vtkPipeline) that enables one to view and configure the objects in the VTK pipeline graphically with a Tkinter-based GUI. The browser should work for any Python script that uses VTK. MayaVi also provides classes to pickle a VTK object and a simple class documentation browser.
PHPLOT is a PHP graphics class for creating charts and plots. It works with PHP5 (but older versions can use PHP4). PHPlot uses the PHP GD extension to produce PNG, GIF, or JPEG images. TrueType fonts (TTF) are optional, or built-in GD fonts can be used. The available plot types are: area, bars, line/points, lines, pie, points, squared, stacked-bars, and thin bar-line. Labels, tick marks, plot legend, X/Y axes, and more are all configurable. Images can be imported as a background, multiple graphs can be drawn on one image, and images can be saved to disk or returned to a browser.
WilmaScope is a Java3D application that creates real-time 3D animations of dynamic graph (network) structures. It comes with a number of layout algorithm plugins, and supports the easy creation of plugins for new layout algorithms. 3D geometries for graph element glyphs and algorithms for graph generation and modification are loaded dynamically as plugins, providing an extremely flexible platform for all manner of graph visualisation applications. The system has been applied with considerable success to a number of graph visualisation problems.
Teddy is an OpenGL-based 3D graphics library written in C++. Its main features are simple scene graph and windowing system-enabling multiple cameras, camera windows, and scenes. It focuses on easy and flexible manipulation of models and model materials in the scene graph. It contains a number of primitive objects like sphere, box, and cone, and it can load LightWave object and scene files.