The maven-buildmetadata-plugin is a Maven 2 plugin that helps you easily add build metadata to generated archive artifacts. When a product is running on an application server, this tool can tell you which version of which artifact is currently running on that server, which artifact maps to which source code version in the SCM repository, what configuration set (including profiles and environment variables) has been used to generate the artifact, on which machine was the artifact built, and when was the artifact built. The provided metadata include SCM information, build time, operating system, Java runtime, Maven execution information, build user, build host name, and build version.
PathVisio is a bioinformatics tool that lets you do everything with biological pathway diagrams. PathVisio helps you organize biological information and lets you present or publish that information easily. You can create and draw pathways, export them to many image formats, annotate them with links to online biological databases such as Ensembl, Entrez or HMDB, and add comments and literature references from pubmed. PathVisio also lets you sort through high-throughput experimental data in pathway context. This is a much more pleasant way to present data than just a large table. You can import microarray, proteomics or metabolomics data. PathVisio has a plugin interface that lets users customize it to new analysis types, new visualization methods, and new pathway formats. PathVisio is compatible with WikiPathways.
Zynaptic Reaction is a flexible asynchronous programming framework for Java which may be used to implement complex event-driven applications. It is heavily influenced by the Twisted programming framework developed by TwistedMatrix Labs for the Python programming language. The focus of the Reaction library is on the concurrency and callback model and as such it is application neutral. It can be used to manage lots of concurrent I/O or to farm out compute intensive tasks to multicore processors. As well as being usable as a basic Java library, Reaction can also run as an independent OSGi service and integrate into any GUI framework you choose.
Perfmon4j is a suite of performance monitoring tools that are intended to be used to diagnose performance bottlenecks and monitor throughput and response time in production Java applications. Its main features include servlet response time monitoring, detailed thread trace sampling, Java instrumentation that enables Package, Class, and Method monitoring without code modification, snapshot monitoring of system metrics including Garbage Collection, Memory Pools, etc., an API for applying additional monitoring points via method annotations or in-line timers, and support for dynamically enabling monitors in running applications.
Ujorm is an easy-to-use ORM framework based on key-value objects. The framework was designed for rapid Java development with great performance and a small footprint. The key features are type safe queries, relation mapping by Java code, no entity states, and a memory overloading protection cache.
jurlmap is a Java library for enabling your Web apps to have clean, REST-like URLs. Some of its features are a simple pattern language for brevity and convenience, direct binding of parameters to bean properties or method parameters, and configuration in plain Java and annotations.
SPT JCR Manager is a simple Web application used to view and manage Java Content Repositories. The application supports viewing the contents of a repository through a tree view, or through querying (XPath, SQL) or searching the entire repository. It supports CRUD operations on Nodes and properties (all standard types mandated by the specifications are supported).
Soundboard is a sound cueing program designed for theatrical use. It aims to be simple to use and maintain cross platform compatibility so that a sound designer who uses a Mac can build a show and have it play back on the theatre's Windows-based playback computer. Soundboard provides a cross platform and open source alternative to programs such as QLab and SFX. It is designed to be simple enough for high school students and community theatres to use, and yet robust enough to be a viable application at a regional theatre.