ASpiReNN is a little C library (with Python bindings) which provides support for simple (leaky integrate-and-fire) spiking neural networks. It is primarily designed for highly recurrent networks, but it can also be used with multi-layer nets, though performance won't be the same. Though only Leaky integrate-and-fire (for the neurons) and Spike-Timing Dependent Plasticity (for learning rules) are currently implemented, adding new models shouldn't be too difficult.
Analyze ECGs is a graphical data analysis tool for use on analog input DAQ data, such as that of RTLab. It is useful for opening the '.nds' file format produced by RTLab's data acquisition program, DAQSystem (it can also open regular ASCII files). Aside from being a general-purpose multichannel analog data editing tool, it also contains custom features useful for analyzing cardiac data. However, it can be used for editing/viewing general-purpose data as well. Additionally, this program can convert '.nds' files to ASCII format data.
Asymptopia Flashcard System uses Motif and LaTeX to produce, manage, and use attractively formatted flashcards. You load some or all of your "collections" and set the timer for pop-up frequency. The GUI interface and "Collection Manager" make creating and modifying flashcards as simple as pushing a single button. A knowledge of LaTeX is only required when entering special symbols.
BinarySEC is an intelligent Web application firewall designed to suppress malicious traffic on Web sites and applications. Its artificial intelligence engine learns normal traffic and blocks malicious requests with very high accuracy. BinarySEC secures against a wide range of attacks, including cross-site scripting (XSS), SQL injection, command injection, PHP includes, parameter tampering, buffer overflow, directory traversal, attack obfuscation, and more. BinarySEC for Apache includes a graphical installer and a Web-based administration interface.
Cell Electrophysiology Simulation Environment is a framework to perform electrophysiological simulations. It can, for example, simulate cardiac myocyte electrical activity. It is useful for simulations of action potentials, individual ionic currents, and changes in ionic concentrations.
Diffusion Tensor Imaging (DTI) is a magnetic resonance imaging method that can be used to measure local information about the structure of white matter pathways within the human brain. Combining DTI data with the computational methods of MR tractography, neuroscientists can estimate the locations and sizes of nerve bundles (white matter pathways) that course through the human brain. DTI-Query allows neuroscientists to place and interactively manipulate box-shaped regions (or volumes of interest) to selectively display pathways that pass through specc anatomical areas.
E-Cell System is an object-oriented software suite for modelling, simulation, and analysis of large scale complex systems such as biological cells. It allows many components, driven by multiple algorithms with different timescales, to coexist. The core library is written in C++ with a Python binding, and frontend software uses Python.