RSS 10 projects tagged "Mathematics"

Download Website Updated 15 Mar 2002 BioJava

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Pop 157.65
Vit 2.38

BioJava aims to provide a comprehensive set of Java components for the rapid development of applications in Bioinformatics. It contains interfaces for representing Sequences, Features, and other important bioinformatics concepts. It can also read and write sequence data in a variety of common formats and communicate with Ensembl databases and with DAS and BioCorba servers.

No download Website Updated 02 Nov 2004 Cactus

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Pop 152.84
Vit 3.46

Cactus is a general, modular, parallel environment for solving systems of partial differential equations. The code has been developed over many years by a large international collaboration of numerical relativity and computational science research groups and can be used to provide a portable platform for solving any system of partial differential equations.

Download Website Updated 28 May 2003 libposition

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Pop 46.43
Vit 1.74

libposition provides a set of functions for calculating motion and displacement in one-, two-, and three-dimensional space. It is part of The Universe Project.

No download Website Updated 27 Apr 2006 SimSoup

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Pop 32.51
Vit 1.65

SimSoup is a graphical artificial chemistry simulator for Linux and Windows. The program enables a chemistry to be defined in terms of molecule types and the possible interactions between them. A simulation run involves setting up a number of molecules of various molecule types in a reactor, and then allowing interactions to take place over a period of time. Interactions taking place in the reactor are shown on a graphical display. The motivation for development of the program is to enable investigations into the behaviour of networks, particularly in relation to 'metabolism first' theories of the origin of life, although the basic design supports modeling of any network in which interactions can take place between nodes. Currently, development has reached the prototype stage.

No download Website Updated 16 Apr 2004 Asymptopia Flashcard System

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Pop 49.19
Vit 3.26

Asymptopia Flashcard System uses Motif and LaTeX to produce, manage, and use attractively formatted flashcards. You load some or all of your "collections" and set the timer for pop-up frequency. The GUI interface and "Collection Manager" make creating and modifying flashcards as simple as pushing a single button. A knowledge of LaTeX is only required when entering special symbols.

Download Website Updated 17 Jan 2008 xmds

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Pop 38.65
Vit 2.58

XMDS is a code generator that integrates equations. You write them down in human readable form in an XML file, and it goes away and writes and compiles a C++ program that integrates those equations as fast as it can possibly be done in your architecture.

Download Website Updated 27 Oct 2005 JFDraw

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Pop 114.86
Vit 3.99

JFDraw is a Java vector graphics drawing application and library package. It is focused on vector graph drawing field. It is useful for mechanical, electronic, architectural graph drawing applications, or even business process or workflow graphs.

No download Website Updated 24 Feb 2007 APBS

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Pop 23.75
Vit 51.13

APBS is a software package for the numerical solution of the Poisson-Boltzmann equation (PBE), one of the most popular continuum models for describing electrostatic interactions between molecular solutes in salty, aqueous media. Continuum electrostatics plays an important role in several areas of biomolecular simulation, including simulation of diffusional processes to determine ligand-protein and protein-protein binding kinetics, implicit solvent molecular dynamics of biomolecules, solvation and binding energy calculations to determine ligand-protein and protein-protein equilibrium binding constants and aid in rational drug design, and biomolecular titration studies.

No download Website Updated 20 Sep 2007 Powua Client

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Pop 23.41
Vit 1.00

Powua is a parallel super-computer consisting of many processors that work simultaneously. The Powua client lets users access this high computing power from wherever they are, directly on their computer, through a simple Internet connection. If your preferred software is supported, you can start using it immediately in Powua and speed up all those processes that would otherwise occupy your processor for a long time. Powua subdivides your operation and distributes it to many processors simultaneously.

No download Website Updated 29 Feb 2008 iloog

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Pop 29.73
Vit 1.45

iloog is a Gentoo-based live CD targeted mainly at students and scientists. It features UnionFS filesystem support that enables you to write everywhere on the LiveCD and install extra packages, a graphical X environment through the Fluxbox window manager, many programming editors and IDEs, and a plethora of scientific applications, including Octave, Namd, Merlin, and full (La)TeX support.

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SBuild

A Scala-based build system.

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CuteMarkEd

A MarkDown editor with live HTML previews.