VMD (Visual Molecular Dynamics) is designed for the visualization and analysis of biological systems such as proteins, nucleic acids, lipid bilayer assemblies, etc. It may be used to view more general molecules, as VMD can read standard Protein Data Bank (PDB) files and display the contained structure. VMD provides a wide variety of methods for rendering and coloring a molecule: simple points and lines, CPK spheres and cylinders, licorice bonds, backbone tubes and ribbons, cartoon drawings, and others. VMD can be used to animate and analyze the trajectory of a molecular dynamics (MD) simulation. In particular, VMD can act as a graphical front end for an external MD program by displaying and animating a molecule undergoing simulation on a remote computer. VMD uses OpenGL and OpenGL Programmable Shading Language for high performance rendering of large structures.
ViewIt is a fast and easy to use image viewer that supports most popular image formats, including JPEG, TIFF, PNG, PSD, raw, dng, and more. Important features include a unique, intuitive interface, fullscreen mode, quick image sorting, printing, digital camera support, and EXIF tags. It currently includes plugins to convert file formats, create Web pages, create Finder previews, lose less JPEG transformations, support shell scripts, rename images sequentially, create contact sheets, and email images.
Vis/Space is a client-server system for visually exploring data structures in 3D virtual space. It allows the placement of various data sources in a three-dimensional environment. Custom search terms can be entered into a query field, or can be navigated to and from an existing object. All objects like images and "text screens" can be moved around. A single click on an image shows the full-resolution version in the foreground. Whole collections of images can be moved. A click to the cube also toggles among several different possible layouts. Data sources include search engines, microblogging, Wikipedia, image/video search, and 4chan.
There are many photo-gallery programs available. Zoph is different, as it concentrates on the management of large collection of photos instead of just showing them on the Web. It can store a lot of information about your photos, including the regular EXIF info, photographer, location, title, description, rating, and the people in the photo. Photos can appear in multiple albums and categories. Additional features include search, slideshows, lightboxes, email, access privileges, and multiple languages.
aiSee reads a textual, easy-to-read, and easy-to-learn graph specification and automatically calculates a customizable graph layout. This layout is then displayed, and can be printed or interactively explored. aiSee features 15 basic graph layout algorithms (including force-directed layout), recursive subgraph nesting, fish-eye views, and an animation interface. It has been optimized to handle huge graphs automatically generated by applications (e.g. compilers).
album is a free HTML/XHTML photo album and gallery generator that supports themes/skins. You can choose different themes or write your own to get different layouts and styles. It creates all your thumbnails (including directory thumbnails) and descends into directories so you can organize your photos. See the home page for more examples. album is also multi-lingual, with many languages being added all the time. N.B.: The purchase link is provided for donations; the software does not cost anything.