MetaPath is a tool for the analysis of metabolic pathways and associated visualization of experimental data. Built on the MetaCyc database, it provides an interactive map in which multiple pathways can be simultaneously visualized. Multiple annotations from the MetaCyc database are available, including synonyms, associated reactions and pathways, and database unification links. Metabolomics change data can be imported via simple CSV formats for visualization on targeted pathways. Pathways can be mined and removed algorithmically to identify key regulated pathways within a given dataset, providing a simper route to metabolic functions.
The j661 project provides a generic CDS (or ARINC 661 Server) in order to facilitate the understanding of the ARINC 661 standard, prototype ARINC 661 concepts and architectures, and facilitate the reuse of ARINC 661 specifications and artefacts between projects. The CDS architecture is designed to allow defining the Server behavior to be easily modified or extended. This is achieved by a modular plug-in architecture, allowing customization at runtime without changing anything in the Server core itself.
AppDynamics an application performance management solution for mission-critical Java applications. It can organize user requests and business transactions, monitor business transaction health, identify and diagnose slow requests, identify and diagnose errors, and drill down. It is built from the ground up for highly distributed service-oriented environments. It has fast root cause diagnostics at the method/class level, but creates no more than 2% overhead, even in high-volume production deployments. It can not only manage applications, but dynamically scale them in cloud and virtual environments.
iSAM is an optimization library for sparse nonlinear problems as encountered in simultaneous localization and mapping (SLAM) in mobile robotics. The iSAM library provides efficient algorithms for batch and incremental optimization, recovering the exact least-squares solution. The library can easily be extended to new problems, and functionality for often encountered 2D and 3D SLAM problems is already provided.
Cyclone is a low-level network toolkit that provides support for HTTP 1.1 in an API very similar to the one implemented by the Tornado Web server. It has localization based on gettext with pluralization support, native support for XMLRPC and JSONRPC, native support for WebSockets (drafts 75 and 76), decent support for sending plain text or HTML email with TLS and attachments, built-in support for Redis, and support for HTTP authentication.
Dr. Geo is an interactive geometry program that is distributed as a universal portable application. It allows one to create a geometric sketch and manipulate it according to its constraints. It is usable at home or at school, in primary or secondary education. It is simple and effective with extended features including scripting and programming.