LabKey Server is open source software that helps scientists manage, analyze, and share complex datasets. It supports tandem mass spectrometry, flow cytometry, assays for neutralizing antibodies, Luminex, observational studies, and secure, Web-based collaboration. The software is modular, configurable, and customizable. It can be installed in your institution on any modern hardware and operating system. It is designed to integrate with your existing systems, instruments, and work flows, and to be readily adapted by skilled programmers to novel methods of inquiry. The project is under active development by a team of professional software engineers and a community of active contributors. New versions are released about four times per year.
MIB Smithy SDK is a dynamic extension to Tcl/Tk (8.4+) that allows development of custom scripts for controlling SNMP agents, manipulating SMI definitions, doing conversions, and more. It is based on the core of Muonics' MIB Smithy, and the SDK supports SMIv1 and SMIv2, as well as SNMPv1/v2c/v3 with HMAC-SHA-96 and HMAC-MD5-96 authentication and DES/CBC and AES128/CFB privacy. It also provides complete read-write access to all elements of SMI/MIB Module definitions, unlike similar extensions that provide only read access to a limited subset. The SDK allows multiple discrete SMI databases and SNMP sessions, and provides all of the built-in validation and error recovery capabilites of the full product, without the visual MIB development environment.
BaseX is a light-weight, high-performance, and scalable XML database system and XPath/XQuery processor, including full support for the W3C Update and Full Text extensions. An interactive and user-friendly GUI frontend gives you great insight into large XML data instances. It is platform independent and works out of the box.
Ldap Synchronization Connector reads from any data source including databases, LDAP directories, or files and transforms and compares this data to an LDAP directory. These connectors can then be used to continuously synchronize a data source to a directory, for a one shot import, or to compare differences by outputting CSV or LDIF format reports. It offers a powerful transformation engine based on a scripting language to easily manipulate data on the fly. Various identity management functions are included for directory-specific compatibility - most notably Active Directory (changing passwords, account status, last logon, etc.).
The 'expp' tool (the Epeios XML preprocessor) reads an XML file to transform it to another XML file. It simplifies the writing of XML files by allowing the handling of macros, the definition and testing of variables, the inclusion of files, and more. This is done by writing, directly in the source XML file, predefined tags owned by a given namespace, tags which are then recognized and handled by the 'expp' tool. The tool is also available as a Java native component.
XML-Grammar-Fiction is a Perl package that provides processors for lightweight markup languages and corresponding XML grammars for writing prose (e.g. stories, novels, and novellas) as well as screenplays. The XML grammars can in turn be translated to XHTML and DocBook/XML. XML-Grammar-Fiction currently offers only very basic functionality, but has good support for UTF-8 and allows one to write bidirectional texts conveniently. It is still under development and may exhibit some quirks.
The adventure PHP framework (APF) is a utility to implement object oriented and generic PHP Web applications. It allows the developer to create programs in compliance with approved software design patterns, and the code base already has answers to many everyday problems. The framework cannot be described as an application that only has to be configured, but rather as a technical basis and design guide for the design of software. Further, it introduced many concepts and efficiency tools already well known in the Java community.
Genit is a framework that builds a static Web site, which does not require a server side programming language or database. Generated sites consist only of XHTML code (plus CSS and media). It runs from the command line, is based on XML, and is designed to be simple, readable, and minimalist.