Puggle is a desktop search engine that provides full text search over files, folders, music, photos, Web pages, and other data that are stored locally on your computer. Puggle is able to create many different indices, each with a different configuration. For example, you may have a different index for your music collection as well as your documents. Each of them can be used on demand, simply by loading it. Furthermore, Puggle supports indexing of portable devices, like USB flash drives or external hard disks. The index will be stored in the device, using relative paths, allowing you to search over the data very quickly on any computer.
elfrc is a program which can turn arbitrary files into ELF object files which can then be linked into your program directly and accessed via simple, user-defined symbol names. Since this is much more effective than turning a binary file into a C array and then compiling that, it's possible to embed even huge (a few hundred megabytes) files directly into the executable and then access the data in constant time without making the compiler or linker eat loads of memory.
ProteomeCommons.org IO Framework is a proper Java framework for handling spectra and peak lists. The framework can read and write to a number of different spectra and peak list formats, and it provides a simple, intuitive Java object model for working with spectra or peak lists. All classes support two methods of handling peak list and spectrum data: in-memory or stream. The goal of this framework is to support all the popular MS and MSMS data formats, and to eliminate any time or effort involved in figuring out how to read and write peak list or spectrum files.
Moab Workload Manager is a High Performance Computing (HPC) resource management and job scheduler. It is designed and developed by the same developers as the popular Maui Scheduler, and it provides the same powerful cluster scheduling capabilities with the addition of events, resources, and grid policy engines.
rsyncbackup is a handy tool for scheduled backups using rsync. rsyncbackup lets you easily setup multiple source folders and destinations, both locally, on your iPod or external firewire disk, or at a remote destination using ssh. rsyncbackup has no GUI, but is based on editing configuration files. The script is meant to be run in a crontab, so user interaction is not neccesary. Basic terminal skills are required to use the program.
Projectory is a platform-independent, Web-enabled project management tool designed to track software projects through all phases of the development lifecycle. It tracks effort expended by developers across multiple teams, projects, and activities, and is suitable for small or large software development groups. Projectory provides accurate metrics of current development activity and lets you mine historical data to improve estimation on future projects.