JSX serializes Java objects to XML. You can persist objects, evolve them, and send them over the network and between applications. Your object data becomes human-readable and human-writable. You can test it, search it, profile it, audit it, and edit it with ordinary text and XML tools. JSX handles all POJOs and also all classes that require Java's own object serialization.
Xapian is a search engine library, scalable to collections containing hundreds of millions of documents. It's written in C++ with bindings for Perl, Python, PHP, Java, Tcl, C#, Ruby, and Lua. It is a highly adaptable toolkit that allows developers to easily add advanced indexing and search facilities to their own applications. It supports the Probabilistic Information Retrieval model and also a rich set of boolean query operators. Omega is a Web search application built upon the Xapian library. It can index a Web server's document tree (including HTML, PDF, OpenOffice, MS Word/Excel/Powerpoint/Works, WordPerfect, RTF, PS, etc.), or data exported from arbitrary sources (e.g. SQL databases).
Frink is a calculating tool and programming language designed to help you in the real world. It tracks units of measurement throughout all calculations and ensures that answers are correct. It converts between systems of measurement, and has a huge library of physical data. It is both a simple calculator for quick calculations and a full-fledged programming language for large tasks. It draws high-quality graphics, handles conversions between time zones, currencies, and historical values of the U.S. dollar and the British pound, translates between several languages, does date/time math, and more.
With MetaModel, you use a type-safe SQL-like API for querying any datastore. It is a data access framework providing a common interface for exploration and querying of different types of datastores. It isn't a data mapping framework. Instead, it emphasizes abstraction of metadata and the ability to add data sources at runtime, making MetaModel great for generic data processing applications, but less so for applications modeled around a particular domain.
OpenGrok is a fast and usable source code search and cross reference engine. It helps you search, cross-reference, and navigate your source tree. It can understand various program file formats and version control histories like Mercurial, Bazaar, Git, ClearCase, Perforce, SCCS, RCS, CVS, or Subversion. In other words, it lets you grok (profoundly understand) the source.