libcsdbg is a C++ exception stack tracer. When an exception is thrown, caught, and handled, libcsdbg offers the tools to create and process the exception stack trace, the path the exception has propagated up the call stack, unwinding it up to the section were it was handled. The traces are detailed with demangled function signatures and additional addr2line information (the source code file and line from which each function was called). libcsdbg can use all the well-known objective code file formats (a.out, elf, coff, ecoff, etc.) and can easily be used as the base for your own instrumentation code. libcsdbg transparently loads the symbol tables of the chosen dynamic libraries and of the executable, demangles function symbols to complete signatures, and binds function names to runtime addresses (even for the DSO symbols).
Organic Photovoltaic Device Model is a 1D Schottky-Read-Hall based drift diffusion model specifically designed to model organic photovoltaic (OPV) devices. It can describe non-geminate recombination via two mechanisms: free-to-trap processes via an exponential tail of trap states, and free-to-free carrier processes. The model solves the drift diffusion equations for electrons and holes, Poisson's equation to calculate the potential distribution in position space, and the Schottky-Read-Hall capture escape equations for a discretized set of energy levels. The model has been used to generate a number of publications. It can simulate the following experiments often used to characterize OPV devices: JV curves (Light/Dark), Charge extraction data (Light/Dark), and Steady state recombination data (Light/Dark).
Brimbox is a database system that was designed to bridge the gap between spreadsheets and custom databases. It is intended to be an alternative to Access and Filemaker. Although Brimbox has its own modular approach, it is customizable in the spirit of Wordpress, though it is a database interface and not a CMS.
Erudite is an application for training and testing back propogation neural networks using the ANNeML (Artifical Neural Network Markup Language) XML format. It supports testing and training neural nets with CSV files and has support for randomized training sets, optional adapting learning rate, sigmoid or hyperbolic tangent transfer functions, optional bias and weight adjustment locking, and more.
The Arakhnê.org Foundation Classes (AFC) is a collection of Java libraries (based on Maven) that provides a collection of utilities that are not provided in the standard Java API. Many utility classes are provided: file filters, progress indicators, arrays, collections, VM utilities, text utilities, math tools (point, vector, matrix, shape, etc.), widgets for AWT, Swing, and Android, a platform-independent graphical API, and more.
Rmollib is a library for manipulating molecules and systems of molecules stored in pdb, gro, and pdbz files. It gives you access to molecules on the atomic, molecular, or system level. The system can be edited in memory and then dumped to disk. It is meant for use with tool such as gromacs, Gaussian, and ToFeT. Rmoltools is a collection of command line tools that use Rmollib to manipulate and edit pdb and gro files. You may find them useful, but they principally serve as an example of how to use Rmollib.
Data Shovel Pinnacle Performance Utilities is a collection of utilities for large input/output tasks. bare takes line feed-separated file names on standard input and concatenates the file contents on standard output. baresha512 takes line feed-separated file names on standard input and provides the SHA512 message digest for the concatenated file content on standard output. Both can optionally open and read files with O_DIRECT, bypassing the kernel's block cache. cock provides a digital petcock. It relives I/O pressure on the kernel by rate limiting data throughput. It can auto-throttle to mitigate lag spikes, or use a specified megabytes-per-second rate limit.