TXR is a new data munging language. TXR's special pattern language provides template-based matching of entire documents or large sections of documents. It also contains a language for functional and imperative programming. It is written in C and takes the form of a utility that is portable to Unix-like platforms and Windows.
MetaPath is a tool for the analysis of metabolic pathways and associated visualization of experimental data. Built on the MetaCyc database, it provides an interactive map in which multiple pathways can be simultaneously visualized. Multiple annotations from the MetaCyc database are available, including synonyms, associated reactions and pathways, and database unification links. Metabolomics change data can be imported via simple CSV formats for visualization on targeted pathways. Pathways can be mined and removed algorithmically to identify key regulated pathways within a given dataset, providing a simper route to metabolic functions.
giis-ext4 (gET iT i sAY) is a file recovery tool for Ext4 filesystems. Once installed, current files and newly created files can be recovered. It allows users to recover all deleted files, recover files owned by a specific user, and recover files of a specific type, such as text or PNG. It uses ext2fs lib and sqlite.
Salad (short for Letter Salad) is an efficient and flexible implementation of the well-known anomaly detection method Anagram by Wang et al. (RAID 2006). Salad is based on n-gram models, that is, data is represented as all of its substrings of length n. During training these n-grams are stored in a Bloom filter. This enables the detector to represent a large number of n-grams in little memory and still being able to efficiently access the data. Salad extends Anagram by allowing various n-gram types, a 2-class version of the detector for classification, and various model analysis modes.
phpMyAdmin is a tool intended to handle the administration of MySQL over the Web. It can create, rename, and drop databases, create/drop/alter tables, delete/edit/add fields, execute any SQL statement, manage keys on fields, create dumps of tables and databases, export/import CSV data, and administrate one single database and multiple MySQL servers.
KDE-Services extends the features of the Dolphin File Manager right-click menu in the KDE graphical environment. It allows you to play and convert between several video formats, extract audio from movies and convert them to MP3 or FLAC, convert audio to MP3 or FLAC, securely send a file or directory to Mailx as an email, send files to Thunderbird as attachments, burn and checksum ISO images, execute scripts and applications, get low-level information on video files, build ISO images from folders, replace text, search, SSH, use Midnight Commander, use system, network, and backup/restore tools, use Samba, extract subtitles from MKV video, multiplex subtitles into MPEG-2 videos, and work with YouTube, DVDs, multimedia, GPG. You can add a timestamp prefix to a filename or directory name. A paranoid shredder, an HTTP publisher, graphic tools, RPM package tools, Xorg configuration, and Dropbox tools are included.