adept is a system for developing short courses for users needing to learn specific skills or knowledge. adept provides JIT ("just in time") learning, in contrast to the more usual "just in case" learning. It can be used as an intranet application to propagate knowledge to employees, or to educate customers via your homepage.
Clarrhmos is a description language and simulator for myocardial structure and electrophysiology. Input to the program is a model file specifying types of cells, action potential shape, refractory period, 3D placement of the cells, relation of parameters to other functions, pacing, electrode placement. Output is a file describing depolarisation and repolarisation of the myocardium and electrograms. A graphic tool for interactive inspection of the output file is also included.
Diogenes is a tool for searching and browsing the Latin and ancient Greek texts published on CD-ROM by the Packard Humanities Institute and the Thesaurus Linguae Graecae. It comes as an easy-to-install stand-alone application for GNU/Linux, Mac OS X, and Windows, based on the Firefox browser (i.e. Xulrunner). Alternatively, it can be installed by a network administrator as a server on a local network, and users then access it via an ordinary Web browser. There is also a command-line tool which can optionally format output as LaTeX instead of HTML.
jbofihe (or more correctly jbofi'e) is a parser for checking the grammatical correctness of Lojban text. It also provides approximate translations of Lojban into English. (Lojban is a constructed human language with the interesting property that its grammar can be cast into a form that Bison can parse.) The package includes cmafi'e (a smaller version without grammar checking), and a program to aid lujvo (compound word) construction.
Jmol is a Free, Open Source molecule viewer and editor. It is a collaboratively developed visualization and measurement tool for chemical scientists. Jmol is an active project, and there are new features being added to it on a daily basis. Users are encouraged to modify it to fit their needs and to contribute their changes to the project.