The Structural Proteomics Application Development Environment (SPADE) provides a community suite for developing and sharing protein structure and sequence tools. It includes a custom molecular viewer, sequence alignment editor, many reusable tools, and a chemical probing suite to support experimental verification of predicted structural models.
LiveUSB OpenBSD is a complete bootable OpenBSD image with which you can get a complete X Window System environment with Window Maker, mplayer, xpdf, and so on. It is deliberately minimalistic. It has all the standard OpenBSD daemons that come with stock OpenBSD including the pf(4) firewall, relayd(8), and spamd(8). It is available in Lite and Full variants. The full version has a whole bunch of packages including Mozilla Firefox, pidgin, and nmap. Both versions include color man pages, full mplayer menus, YouTube download scripts, and more.
BorderFlow implements a general-purpose graph clustering algorithm. It maximizes the inner to outer flow ratio from the border of each cluster to the rest of the graph. The main advantage of the algorithm is that it does not need parametrization to compute results of high accuracy.
Lightning Fast Shop (LFS) is an online shop and e-commerce solution. It installs in minutes and is ready to go out of the box. Some of it main features are variants and configurable products, related products, accessories, facetted navigation, packaging units, vouchers, and discounts, It provides variable shipping and payment methods, a one page checkout page, and much more.
datafromdump is a class that manipulates table dumps from full MySQL database dumps. The SQL CREATE and INSERT statements for a number of given tables can be extracted and executed immediately or saved to a new database dump file. During the first scan of a dump file, it tries to create a "metadata" file, so the subsequent data extraction jobs will be much faster. CREATE TABLE operators can be executed or included into the resulting SQL file or not, according to passed parameters. A short "statistic page" can be printed after the job.
excat is a simple tool that auto-detectd (potentially nested) compressed file formats and decompresses any combination of them using libarchive, thus unifying zcat, bzcat, lzcat, xzcat, etc. in a single (static, if you need it) binary. It may act as a drop-in replacement for any *cat.