GoFigure2 is a cross-platform application for visualization, processing, and analysis of out-of-core multidimensional microscopy data (5D data sets). Users can visualize images, segment cells in 3d, track cells through time, and detect cell divisions to generate lineages. Results are stored in a MySQL database back-end. Once data has been processed, cell-based object features are quantified and can be used for sorting, color-coding, analysis, or exported to external tools. GoFigure2 was developed for biology research including studying the development of embryos (zebrafish and mouse), synthetic biology (signaling), and for drug screening.
ChaiScript is an embedded scripting language designed from the ground up to directly target C++ and take advantage of modern C++ development techniques. Being a native C++ application, it has some advantages over existing embedded scripting languages. It uses a header-only approach, which makes it easy to integrate with existing projects. It maintains type safety between your C++ application and user scripts. It supports a variety of C++ techniques including callbacks, overloaded functions, class methods, and STL containers.