RSS 5 projects tagged "Biology"

No download Website Updated 18 Dec 2010 SwissParser

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Pop 23.13
Vit 2.30

SwissParser allows you to define in a few lines a parser able to deal with the flat file format used in bioinformatics software such as UniProt, KEGG, etc.

Download Website Updated 24 May 2010 StarORF

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Pop 34.53
Vit 37.80

StarORF is a tool that facilitates the identification of the protein(s) encoded in DNA sequences and allows for transforming input sequence in its reverse complements. It allows students to define the minimal ORF length detected and highlighted by the software. Students can see putative ORF protein sequence (longer than specified ORF length), visualize start and stop codons in the sequence, and navigate imported sequences. The StarORF site contains a software user manual, video tutorial, and exercises applicable to high school and college classrooms.

No download No website Updated 10 Aug 2010 CanvasXpress

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Pop 19.49
Vit 36.72

CanvasXpress is a JavaScript library based on the HTML5 canvas tag that provides a generic and simple way to display genomics data. It supports bar graphs, line graphs, bar-line combination graphs, box plots, dot plots, area graphs, stacked graphs, percentage-stacked graphs, correlation plots, Venn diagrams, heat maps, Newick trees, 2D-scatter plots, 2D-scatter bubble plots, 3D-scatter plots, pie charts, networks (or pathways), and a genome browser. It also supports a few data transformations like log and exponential transformation, z-score, percentile transformation, and ratio. It also supports grouping of samples, zooming, events, and more.

No download Website Updated 22 Jul 2011 Wildlife Stock Monitor

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Pop 24.37
Vit 1.52

Wildlife Stock Monitor is a grid-based GIS system for inventorying biotopes.

Download Website Updated 14 Oct 2013 SimThyr

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Pop 45.39
Vit 4.45

SimThyr is a continuous simulation program for pituitary-thyroid feedback control. Applications of this program cover research, including development of hypotheses, and education of students in biology and medicine, nurses, and patients.

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audit daemon

A package of user-space audit utilities.

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The Eventual PlayFramework-AngularJS-Bootstrap-MongoDB Seed Project

A seed project that combines Play Framework, AngularJS, Bootstrap, and MongoDB.