228 projects tagged "Bioinformatics"

No download Website Updated 28 Oct 2012 Bone Age

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Pop 36.47
Vit 7.43

Bone Age is a tool for radiologists, endocrinologists, and orthopaedic surgeons. It helps in the assessment and monitoring of skeletal age using the standards of Greulich and Pyle (2nd ed. Stanford, CA, 1959).

Download Website Updated 31 Jan 2004 Brook for GPUs

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Pop 51.81
Vit 1.00

Brook for GPUs is a compiler and runtime implementation of the Brook stream programming language for modern graphics hardware. The goals for this project are to demonstrate general purpose programing on GPUs, to provide a useful tool for developers who want to run applications on GPUs, and to research the stream language programming model, streaming applications, and system implementations.

Download Website Updated 08 Sep 2004 CARE2X

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Pop 143.46
Vit 2.48

Care2x (formerly Care 2002) is software for hospitals and health care organizations. It is designed to integrate the different information systems existing in these organizations into a single efficient system. It solves the problems inherent in a network of multiple programs that are incompatible with each other. It can integrate almost any type of services, systems, departments, clinics, processes, data, or communication that exist in a hospital. Its design can even handle non-medical services or functions like security or maintenance. All of its functions can be accessed with a Web browser, and all program modules are processed on the server side.

No download Website Updated 26 Jun 2009 CESE Plus

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Pop 19.21
Vit 42.40

CESE Plus is a software platform designed to perform a wide array of cell electrophysiology simulations. It is a universal simulation environment supporting multitude of cell models and systems, including cardiac atrial, ventricular and SA node models, neuronal models, and more. CESE Plus is an enhanced commercial version of the CESE platform. These enhancements include full support for Mac OS X; a split display for comparison of multiple simulated data traces; data import and export between MS Excel, Axon text files, and ASCII tables; powerful cursors to select regions of interest and perform online measurements and statisical analysis; VirtuClamp to simulate voltage clamp and current clamp protocols; improved equation solvers with greater accuracy; and full commercial support.

No download Website Updated 28 Oct 2012 CF Score

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Pop 25.57
Vit 6.55

CF Score is a tool for radiologists and respiratory physicians. It assists in the scoring and monitoring of chest radiographs of patients with cystic fibrosis, using the Brasfield method.

Download Website Updated 21 Mar 2012 CGAL

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Pop 106.77
Vit 3.56

CGAL, the Computational Geometry Algorithms Library, is a large C++ library of geometric data structures and algorithms such as Delaunay triangulations, mesh generation, Boolean operations on polygons, and various geometry processing algorithms. CGAL is used in various areas: computer graphics, scientific visualization, computer aided design and modeling, geographic information systems, molecular biology, medical imaging, robotics and motion planning, and numerical methods.

Download Website Updated 25 Apr 2007 CLC Free Workbench

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Pop 26.08
Vit 3.32

CLC Free Workbench enables users to perform bioinformatics analyses and smooth data management, combined with excellent graphical viewing and output options. Some of the features are GenBank searching, including download facilities and full graphical overview; user-friendly graphical tools for viewing DNA, RNA, and protein sequences; full integration of data input, data management, calculations results, and data export; DNA, RNA, and protein alignment tools; reverse translation; restriction site analysis; and phylogenetic analyses.

Download Website Updated 22 Jul 2010 COPASI

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Pop 24.08
Vit 3.10

COPASI is a software application for modeling and simulation of biochemical networks. The software package has a GUI that lets users define biochemical network models by entering chemical reactions and kinetic equations. A powerful simulation engine can then perform simulations of the dynamics of the networks and carry out many different computational analyses. COPASI can simulate dynamics using either an ODE approach or a stochastic chemical kinetics approach (Gillespie-type algorithms).

No download Website Updated 02 Nov 2004 Cactus

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Pop 151.00
Vit 3.46

Cactus is a general, modular, parallel environment for solving systems of partial differential equations. The code has been developed over many years by a large international collaboration of numerical relativity and computational science research groups and can be used to provide a portable platform for solving any system of partial differential equations.

No download No website Updated 10 Aug 2010 CanvasXpress

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Pop 18.22
Vit 37.24

CanvasXpress is a JavaScript library based on the HTML5 canvas tag that provides a generic and simple way to display genomics data. It supports bar graphs, line graphs, bar-line combination graphs, box plots, dot plots, area graphs, stacked graphs, percentage-stacked graphs, correlation plots, Venn diagrams, heat maps, Newick trees, 2D-scatter plots, 2D-scatter bubble plots, 3D-scatter plots, pie charts, networks (or pathways), and a genome browser. It also supports a few data transformations like log and exponential transformation, z-score, percentile transformation, and ratio. It also supports grouping of samples, zooming, events, and more.

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Open Camera

A camera app for Android.

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mcl-edge

A command-line network analysis workbench.