RSS 3 projects tagged "Bioinformatics"

No download No website Updated 25 Sep 2012 Bio::SeqReader

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Pop 30.50
Vit 1.00

Bio::SeqReader provides a lightweight alternative to Bioperl when all you really need is a helper for reading sequence data. The Bio::SeqReader::Fastq class correctly handles FASTQ input with multiline sequence or quality data.

No download Website Updated 23 Feb 2011 Berkeley DB XML

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Pop 151.11
Vit 3.26

Berkeley DB XML is a native XML database engine for use within your product. Made available as a C++ library with language bindings for Java, Perl, Python, PHP, and Tcl, it integrates directly into your application (it is not a standalone database server). It provides XQuery access into a database of document containers. XML documents are stored and indexed in their native format using Berkeley DB as the transactional database engine.

Download Website Updated 29 Dec 2004 Genome-Tools

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Pop 21.49
Vit 1.50

Genome-Tools provides flexible tools and a simple API for genomic sequence processing on genomes published in the standard Genbank format. A CGI-based Web interface is also available.

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Marvin

An extensible image processing framework for Java.

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DynamicReports

A Java library for reporting.