RSS 14 projects tagged "Bioinformatics"

No download Website Updated 15 Apr 2014 Wandora

Screenshot
Pop 267.63
Vit 86.53

Wandora is a general purpose data extraction, management, and publishing application based on Topic Maps and Java. Wandora has a graphical user interface, layered presentation of knowledge, several data storage options, rich data extraction, import and export capabilities, and an embedded HTTP server that enables dynamic publication of Topic Maps. Wandora is well suited for rapid ontology construction and knowledge mashups.

No download Website Updated 23 Feb 2011 Berkeley DB XML

Screenshot
Pop 123.17
Vit 3.11

Berkeley DB XML is a native XML database engine for use within your product. Made available as a C++ library with language bindings for Java, Perl, Python, PHP, and Tcl, it integrates directly into your application (it is not a standalone database server). It provides XQuery access into a database of document containers. XML documents are stored and indexed in their native format using Berkeley DB as the transactional database engine.

Download Website Updated 02 Dec 2009 Bio2RDF

Screenshot
Pop 29.12
Vit 2.51

The Bio2RDF software is a package which resolves bio2rdf.org semantic Web identifiers corresponding to bioinformatics data and knowledge bases into RDF files which can be consumed by any generic RDF processor.

Download Website Updated 01 Mar 2008 Babase

Screenshot
Pop 35.44
Vit 1.00

Babase is a baboon data management system. It is designed to facilitate the retrieval, storage, maintenance, and analysis of the following broad data categories: group membership, social status (dominance rank), life events, sexual cycle events (including progeny), sexual cycle day-to-day status, dyadic social interactions, focal animal samples, and multi-party social interactions. Integration of other data is supported. Babase is designed for Web access.

No download Website Updated 10 Aug 2006 JGraphpad Pro

Screenshot
Pop 47.81
Vit 3.98

JGraphpad Pro is a complete application framework for rapid development of JGraph tools. It is meant for developers who wish to provide a stand-alone, rich-client graph application. The user interface is configurable with XML and it uses a plugin architecture for extra functionality. It features a wide range of application components like palette, overview, the ability to export to many image and XML formats, copy and paste, drag and drop, rich text labels, database or backend connectivity, and visual complexity management. You can use it to create workflow editors, call graphs, CAD tools, network diagrams, database visualization tools, and more.

Download Website Updated 10 Jul 2006 kfile_chemical

Screenshot
Pop 19.13
Vit 1.82

kfile_chemical is a set of kfile plugins for the KDE desktop that extract metadata from chemistry documents. This metadata can be used by desktop search engines like Kat. It supports PDB, MDL mol/sd, CML, ShelX, and CIF files.

No download Website Updated 20 Jun 2006 JColorGrid

Screenshot
Pop 27.60
Vit 1.75

JColorGrid is an application for graphical data exploration and the rendering of colorgrids, a generalization of the popular heat-map representation. The software exists as a command-line application, a graphical viewer, and an API for development.

No download Website Updated 16 Nov 2005 Sample Inventory Program

Screenshot
Pop 33.62
Vit 1.00

The Sample Inventory Program (SIP) is a laboratory inventory management system (LIMS) for Zope. Many integration tests exist for various aspects of the SIP application, ranging from command line importing of samples and project configuration to CSV Web-based importing of sample modifications.

Download Website Updated 27 Oct 2005 JFDraw

Screenshot
Pop 115.59
Vit 3.99

JFDraw is a Java vector graphics drawing application and library package. It is focused on vector graph drawing field. It is useful for mechanical, electronic, architectural graph drawing applications, or even business process or workflow graphs.

Download Website Updated 23 Aug 2005 ADF MAGE-ML Tool

Screenshot
Pop 13.67
Vit 1.42

The aim of ADF MAGE-ML Tool is to provide a module for converting ADF files (a tab delimited file representing microarray design layout) into MAGE-ML format, and for generating an ADF from an array design described in MAGE-ML format. The module is build upon the ADF specifications and using MAGE-Stk APIs (Java). MIAME-compliance checking, a logging system, and integration of LifeScience Identifier (LSID) specifications are key components of the module. The module can be used via the command line or a graphical user interface.

Screenshot

Project Spotlight

Mroonga

A fast full-text search engine for MySQL.

Screenshot

Project Spotlight

Razer device configuration tool

A Razer device configuration tool.