Wandora is a general purpose data extraction, management, and publishing application based on Topic Maps and Java. Wandora has a graphical user interface, layered presentation of knowledge, several data storage options, rich data extraction, import and export capabilities, and an embedded HTTP server that enables dynamic publication of Topic Maps. Wandora is well suited for rapid ontology construction and knowledge mashups.
Taverna is a collection of workflow enactment and description components, including a high level language for workflows called Scufl (Simple Conceptual Unified Flow Language), a pure Java object model, parser to populate the model, and a set of views and controllers (including some Swing components to drop into your workflow-enabled applications). In order to actually run workflows you also need the myGrid workflow enactment engine.