Aigaion is a Web-based shared bibliography manager built on PHP/MySQL. It is based on the BibTeX format, but has support for other formats as well. Some of its key features are extensive support for organizing a bibliography in a topic structure, personal and public annotations on each publication, multi-user support, easy import/export, and an intuitive user interface.
Invenio (formerly CDSware) is a suite of applications that provides the framework and tools for building and managing an autonomous digital library server. It complies with the Open Archives Initiative metadata harvesting protocol (OAI-PMH) and uses MARC 21 as its underlying bibliographic standard. Its flexibility and performance make it a comprehensive solution for the management of document repositories of moderate to large size.
tbibtools provide a simple regexp-based BibTeX parser that can be used to sort bib files, reformat bib files, list keys in a bib file, and show bib entries matching a regular expression. It is available as both a script and a VIM plugin. It makes a few assumptions about how a bib file should look like.
RefDB Publication List is an add-on for RefDB that provides a simple way to dynamically create publication lists from the reference data stored in your database. You can compile the publication list for your CV or for your annual department report with a single command instead of maintaining it manually.
I, Librarian is a PDF manager or PDF organizer that allows individual researchers or a group of researchers to create an annotated collection of PDF articles. Users may build the virtual library collaboratively, thus sharing the workload of literature mining. It enables smart browsing and fast searching in reference data and PDF files, and includes an advanced tool for mining scientific literature from PubMed, PubMed Central, NASA ADS, arXiv, IEEE Xplore, and HighWire Press.
Bibfilex is software to create and manage archives of bibliographical items (books, articles, etc.) according to Biblatex structure and rules. It is far less advanced than other bibliographic managers like JabRef, and allows only a few customizations. Its strength is speed and lightness, especially when used with many items. It uses SQLite as a database. It can store the items according to each of the entry types described in the Biblatex manual (book, article, etc.), import the content of a file in Biblatex format (like a JabRef database, a Mendeley BibTex exported file, or a Google Books BibTex downloaded file), export data to a Biblatex file (like a JabRef database), locate an item just typing its author name, title, etc. filter the items by selecting a keyword in a list, filter the items according to three different conditions (or to manually modify the SQL statement of the filter to make it more suitable or complex) or according to the \cite commands contained within a Latex document, associate various attachments (files of every kind) with each item, activate autocompletion of data in each field with “Ctrl + Space”, automatically create unique BibTex keys according to a pattern defined by the user, and specify the fields (columns) shown in the grid view of the data. It is also possible to replace the \cite and \printbibliography commands in a Latex document with extended citations and bibliography, which are composed according to a user-defined pattern, to export the Latex file in other formats more easily.