Wandora is a general purpose data extraction, management, and publishing application based on Topic Maps and Java. Wandora has a graphical user interface, layered presentation of knowledge, several data storage options, rich data extraction, import and export capabilities, and an embedded HTTP server that enables dynamic publication of Topic Maps. Wandora is well suited for rapid ontology construction and knowledge mashups.
Thinknowlogy is grammar-based software, designed to utilize the Natural Laws of Intelligence in grammar, in order to create intelligence through natural language in software. This is demonstrated by programming in natural language, reasoning in natural language and drawing conclusions (more detailed than scientific solutions), making assumptions (with self-adjusting level of uncertainty), asking questions (about gaps in the knowledge), and detecting conflicts in the knowledge. It builds semantics autonomously (with no vocabularies or words lists), detecting some cases of semantic ambiguity. It is multi-grammar, proving that Natural Laws of Intelligence are universal.
BioJava aims to provide a comprehensive set of Java components for the rapid development of applications in Bioinformatics. It contains interfaces for representing Sequences, Features, and other important bioinformatics concepts. It can also read and write sequence data in a variety of common formats and communicate with Ensembl databases and with DAS and BioCorba servers.
Jess is a fast, light rule engine and scripting environment written entirely in Java. You can build Java software that has the capacity to "reason" using knowledge you supply in the form of declarative rules. It is supplied as a programmer's library, making it ideal for embedding in larger applications. Jess includes development tools built on the Eclipse platform. It is free for academic use and can be licensed for commercial use.
RapidMiner (formerly YALE) is a flexible Java environment for knowledge discovery in databases, machine learning, and data mining. Many nestable learning and preprocessing operators (including Weka) are provided. It features an XML-based graphical user interface, a plugin mechanism, and high-dimensional plotting, and provides an easy-to-use extension mechanism that makes it possible to integrate new operators and adapt the system to your personal requirements. A command line version is also included.
Kandid is a system to evolve graphics. Graphics, in Kandid, are not drawn by hand. Instead, new forms can be found using genetic algorithms. To achieve this aim Kandid simulates evolution using sexual reproduction and mutation. But there is no fitness function inside the program. Only the user can decide what images are interesting. Populations and genes can be stored in XML format. Image calculation is based on Lisp-like expressions, Lindenmayer Systems, Iterated Function Systems, Linear Cellular Automata, Voroni diagrams, and layered textures or isosurfaces rendered by the Persistence of Vision raytracer.