Endeavour Agile ALM is a rich Web-based solution to manage the creation of large-scale enterprise systems in an iterative and incremental agile development process. It features support for Use Case management, iterations, project plan, change requests, defect tracking, test cases, tasks, document management, and many other process artifacts.
Codendi is a collaborative platform for application lifecycle management. It features configuration management, universal trackers (for bugs, tasks, requirements, etc.), document management, an Eclipse plugin, a continuous integration interface, reporting, workflow, and more. It is based on the LAMP architecture (Linux, Apache, MySQL, PHP) and offers a SOAP Web Services interface.