GridShib is a glue layer that transparently binds a grid service provider such as the Globus Toolkit to a role-based authentication and access control system such as Shibboleth, so as to provide fine-grained access controls to members of virtual and physical organizations within a grid without having to distribute and synchronize information about individual users between those organizations.
The Geomajas API project contains some annotations that can be used to indicate which parts (which classes and which (public) methods or fields) are considered as the API. This is particularly useful for projects where you want to mark the API without the need to refactor everything to interfaces and factories.
ProteomeCommons.org IO Framework is a proper Java framework for handling spectra and peak lists. The framework can read and write to a number of different spectra and peak list formats, and it provides a simple, intuitive Java object model for working with spectra or peak lists. All classes support two methods of handling peak list and spectrum data: in-memory or stream. The goal of this framework is to support all the popular MS and MSMS data formats, and to eliminate any time or effort involved in figuring out how to read and write peak list or spectrum files.
The Fressia Project is an effort to develop a framework for testing automation. It's intended for users (testers) who want a simple tool that can be used just out of the box. It was originally conceived as part of the QA efforts at the US National Optical Astronomy Observatory. It has been delivered to the community because, despite it still being at early stages, it has proven to be a useful general purpose testing tool. It is designed to provide functional testing, system testing, system integration testing, white (black) box testing, automated regression testing, acceptance testing, etc.