ProteomeCommons.org IO Framework is a proper Java framework for handling spectra and peak lists. The framework can read and write to a number of different spectra and peak list formats, and it provides a simple, intuitive Java object model for working with spectra or peak lists. All classes support two methods of handling peak list and spectrum data: in-memory or stream. The goal of this framework is to support all the popular MS and MSMS data formats, and to eliminate any time or effort involved in figuring out how to read and write peak list or spectrum files.
Isobel is a framework to build complex information retrieval and analysis systems. Isobel can be functionally divided in two subsytems, Isobel Gatherer (the crawling and filtering subsystem) and Isobel Analyzer (the analysis subsystem). The two subsytems can also be used separately. Isobel Gatherer offers ready-to-use services like content fetching, scheduling, document format conversion, Hyperlink graph storage and analysis, content storage and indexing. A programmer may easily add new services. Isobel Analyzer uses the IBM UIMA architecture to reuse the analysis components developed for this architecture.
Apache XML Graphics Commons is a library that consists of several reusable components used by Apache Batik and Apache FOP. Many of these components can easily be used separately outside the domains of SVG and XSL-FO. You will find components such as a PDF library, an RTF library, Graphics2D implementations that let you generate PDF and PostScript files, and much more.
WSO2 Web Services Framework for C is a standards compliant, enterprise grade, C library for providing and consuming Web services. WSO2 WSF/C is a complete solution for building and deploying Web services, and implements a very wide range of WS-* specifications, including MTOM, WS-Addressing, WS-Policy, WS-Security, WS-SecurityPolicy, WS-Reliable Messaging, and WS-eventing. All the Web services specification implementations are tested for interoperability with Microsoft .NET, WSO2 WSAS, and other J2EE implementations.
WSO2 Web Services Framework for PHP is a PHP extension for providing and consuming Web services. WSO2 WSF/PHP supports SOAP 1.1, SOAP 1.2, WSDL generation, WSDL mode (WSDL 1.1 and WSDL 2.0), REST style invocation, integrated Data Services capabilities, and some of the key WS-* stack specifications such as: SOAP MTOM, WS-Addressing, WS-Security, WS-SecurityPolicy, and WS-ReliableMessaging.
jSmaTeP assists in the use of Java for processing import and export data by configuring a data structure rather than by programming it. The structure of the import data is specified in an XML file. jSmaTeP then generates a value object representing exactly one row or record in the import file based on a given XML data configuration. This means that if the import or export format changes, only the XML data configuration needs to be changed to match it.