MetaPath is a tool for the analysis of metabolic pathways and associated visualization of experimental data. Built on the MetaCyc database, it provides an interactive map in which multiple pathways can be simultaneously visualized. Multiple annotations from the MetaCyc database are available, including synonyms, associated reactions and pathways, and database unification links. Metabolomics change data can be imported via simple CSV formats for visualization on targeted pathways. Pathways can be mined and removed algorithmically to identify key regulated pathways within a given dataset, providing a simper route to metabolic functions.
LoginIDS provides functions to analyze log files from different services in order to detect unusual login behavior. The normal user behavior is learned by analyzing log files and saved in a database. Logins are analyzed by time, service, source, and destination address. If a user's login is new or considered unlikely by LoginIDS, an alert is generated. Alerts can be handled by external scripts and viewed using the log file management system Splunk and the LoginIDS App.
Pkviz is a tool for plotting and cycling through and animating a series of network packets captured by tcpdump. What makes it unique is that the packets’ structure is visualized, not any labels and not time itself. Pkviz takes each byte in a packet and plots it out end-to-end, left-to-right, from the first byte to the last. How high the dot gets plotted depends on the value of the byte: bytes with a value of 0 are at the bottom and those which are 255 (0xff) – the maximum value of a byte – get plotted at the top. This might not be interesting for one packet, but that changes when you start looking at thousands of packets. Pkviz can cycle through thousands of packets in the set so you can see what happened on the wire.
The Isotrol DocGen BOUML plugout is a practical tool to update the OpenUP-based documentation of your project dynamically. DocGen extracts texts and diagrams from a BOUML project and inserts them in an OpenOffice.org Writer document. It's preconfigured with a generic project template and three definition files for Analysis, Design, and Architecture OpenUP-based documents. You can also insert predefined tables and link external images to embed them into the document. You can define your own template and file definitions. It's as easy as writing an OpenOffice.org Writer document and designing your own page format, cover, index page, headings styles, variables, etc. Afterwards, you create an XML file pointing to the parts of the BOUML project with the contents.
PanBI is a collection of analytics modules for existing information systems. For each information system, it provides data extraction, transformation, and loading logic coupled with an OLAP schema, delivering OLAP functionality to an unprecedented user base. It extracts data from the source database, sets up a warehouse schema, loads the data into the warehouse, and has defined OLAP cubes. It does all this automatically for a one-click-run experience. Supported systems: dotProject, NesterSoft WorkTime, Subversion, and MantisBT (under development).
OCRFeeder is a document layout analysis and optical character recognition application. It is able to automatically outline a document image's contents, distinguish between graphics and text and perform OCR over the latter. It can export to several formats, its main one being ODT. OCRFeeder has a GTK+ graphical user interface that allows the user to control the application and, for example, edit and correct the automatic recognition. It can also be used from the command line for automation.