The Bioinformatics Benchmark System is an attempt to build a reasonable testing framework, tests, and data, to enable end users and vendors to probe the performance of their systems. It is not trying to be the last word in informatics benchmarking, as there are simply too many codes, tests, data sets, and databases. The goal is to create a core of tests that all may download and use to probe specific elements of system performance. The end goal is to enable a pluggable set of tests, including the core tests, so that performance data may be gathered.
Cactus is a general, modular, parallel environment for solving systems of partial differential equations. The code has been developed over many years by a large international collaboration of numerical relativity and computational science research groups and can be used to provide a portable platform for solving any system of partial differential equations.
Calcoo is a scientific calculator designed to provide maximum usability. Its features bitmapped button labels and display digits to improve readability, no double-function buttons, undo/redo buttons, copy/paste interaction with the clipboard, both RPN and algebraic modes, two memory registers with displays, displays for Y, Z, and T registers, and tick marks to separate thousands. Calcoo is written in C using the GTK+ widget library (v.2.2+).
ChemApp is a programming tool from the area of computational thermochemistry. It is a library consisting of a rich set of subroutines, based on the thermodynamic phase equilibrium calculation module of ChemSage. It permits the calculation of complex, multicomponent, multiphase chemical equilibria and their associated energy balances. ChemApp is available as object code for a wide range of platforms and as a shared library/DLL. ChemApp "light" is the free version of ChemApp, and although it is restricted in two ways compared to the regular version, it gives you almost the same functionality.
Cybercluster is a multi-master replication solution. Cybercluster has no single point of failure, an integrated load balancer, an integrated replication server, a monitoring server (to track replication), a consistency checker, an optional 2 Phase Commit for cluster-wide writing, support for all PostgreSQL features. Cybercluster is easy to setup. In contrast to many other solutions, Cybercluster is built on top of the PostgreSQL core and has full access to PostgreSQL internals. Cybercluster is heavily based on the concepts of PGCluster.
DISLIN is a high-level, easy-to-use plotting library for displaying data as curves, bar graphs, pie charts, 3D-colour plots, surfaces, contours, and maps. Several output formats are supported, such as X11, VGA, PostScript, PDF, CGM, HPGL, TIFF, and PNG. Plotting extensions for the interpreting languages Perl, Python, and Java are also supported for most operating systems.
EGO is a program to perform molecular dynamics simulations on parallel as well as on sequential computers. Supported parallel machines include the Hitachi SR8000, CRAY-T3E, IBM-SP2, Fujitsu VPP700, Parsytec-CC under PARIX, and inhomogeneous clusters of UNIX workstations under PVM or MPI. EGO also runs sequentially on any decent UNIX workstation, even Windows95/NT PC's (with a GNU-C compiler) can be used.
GraphPak is a programming library of 2D and 3D charting objects for the Qt toolkit. It provides software developers with a set of C++ objects to easily create charts or graphs that aid in the visual presentation of technical and business data. This release includes Bar, Line, Pie, Ring, Area, Hi-Lo, Box and Whisker, and Polar charts. It is based on the KD Chart product from Klarälvdalens Datakonsult AB.