Jmol is a Free, Open Source molecule viewer and editor. It is a collaboratively developed visualization and measurement tool for chemical scientists. Jmol is an active project, and there are new features being added to it on a daily basis. Users are encouraged to modify it to fit their needs and to contribute their changes to the project.
The 3D Stacked Horizontal Bar Graph provides versatile components so that Web authors and Java developers can easily build and publish dynamic and interactive bar graphs. There are multiple data access methods, including database binding, a file reader, and an HTML page reader. This component also provides the ability to interact with other page components.
JOGL is a reference implementation of the Java bindings for the OpenGL API, which is designed to provide hardware-supported 3D graphics. It provides full access to the APIs in the OpenGL 1.4 specification as well as nearly all vendor extensions, and integrates with the AWT and Swing widget sets.
The Deimos Project is a 3D space combat simulator and modular game library collection. It includes a 3D modeler designed with a programmer's needs in mind. It allows you to construct 3D models by writing Java source code. All you need to design a model is a computer, some graph paper, and a pencil. The modeler's internals function as a simple OpenGL scene graph API, without preventing the use of low-level OpenGL commands. For storing settings and other hierarchically-representable data, the project provides a Hierarchy library that stores data atomically using XML. It also features a timing library, a game object container system, and many other features.
YAJOGLB (Yet Another Java OpenGL Binding) allows Java programmers to access their native OpenGL library. The library is implemented using Java's JAWT to access the native windowing system, along with JNI calls to OpenGL. Programs using the binding must use the shared library provided, since this is not a pure Java library.