Geneious
Geneious is an integrated bioinformatics tool suite for manipulating, finding, sharing, and exploring biological data such as linear and circular DNA sequences, proteins, phylogenies, chromatograms, 3D structure information, publications, etc. It features sequence alignment and phylogenetic analysis, restriction analysis, contig assembly, access to biological databases at NCBI and elsewhere (PubMed, Nucleotide, PopSet, SNP, Structure, PFAM, etc.), BLAST, and more. It includes an API for creating your own plugins.
| Tags | education Scientific/Engineering Bioinformatics Mathematics Visualization |
|---|---|
| Operating Systems | Windows Windows Windows Solaris Mac OS X Windows Windows Unix |
| Implementation | Java |
Recent releases
- 09 Nov 2010 22:07
Release Notes: New features and bugfixes.
- 14 Oct 2010 12:15
Release Notes: Several issues were fixed.
- 16 Jul 2010 10:30
Release Notes: Paired end read support was added. Performance was improved and memory usage on big contigs was greatly reduced. A split view allows you to open documents in multiple views and zoom levels. A deleted items folder was added. Changes to documents are now recorded in the document history. Numerous new importers and exporters were added. Reference sequence assembly now makes use of multiple CPUs. Many other changes were made.
- 18 Dec 2009 11:51
Release Notes: An option was added to search on either forward or reverse strand in Search for Motifs. Bugs were fixed.
- 30 Nov 2009 06:51
Release Notes: Fast de novo assembly is now possible, and is capable of assembling 100,000 454 reads or 500,000 Illumina Solexa reads without a reference sequence in a few minutes on a desktop machine. A new dotplot is used that is capable of dotplotting genome sized sequences with brand-new controls. Handling of next-gen sized data was greatly improved in terms of speed and memory efficiency when dealing with large next-gen data sets. A restriction site or other extension can be added to primers and Geneious takes this in to account when testing the primer and using it for other analysis. Much more was also done.
Recent comments
Geneious has a commercial licence and comes in two versions, Basic and Pro.
Geneious Basic includes a free 14-day trial of the Geneious Pro features. After your trial, Pro features will be disabled. You will then need to purchase a license to unlock Pro features. Alternatively, you are welcome to continue using Geneious Basic for academic purposes. Commercial users are entitled to download and use Geneious Basic, including the free Geneious Pro trial, for evaluation purposes only.
what sort of licensing is associated with Geneious? (GPL?) thank you!
Heartbeat
- Popularity Score
- 101.20
- Vitality Score
- 13.77
- Subscriptions
- 17
