RSS All releases tagged Bugfixes

Release Notes: This release adds the Domain Enhanced Look-up Time Accelerated BLAST application, a new finite size correction (FSC) algorithm, and the Makeprofiledb application. Assorted bugfixes.

  •  24 Aug 2010 22:28

Release Notes: This release introduces BLAST Archive format to permit reformatting of stand-alone BLAST searches with the blast_formatter. It adds support for translated subject soft masking in the BLAST databases. It adds support for the BLAST Trace-back operations (btop) output format. It adds command line options to blastdbcmd for listing available BLAST databases. Improved performance of formatting of remote BLAST searches. Uses a consistent exit code for out of memory conditions. A fix for a bug in indexed megablast with multiple space-separated BLAST databases. The Windows installer has been fixed for 64-bit installations.

  •  17 Apr 2009 11:54

Release Notes: This release adds support for spaces in database pathnames on Windows, fixes an ordering bug in queries, and modifies the 2-hit blastn algorithm so that no overlap is allowed between hits. Ungapped blastn searches now allow arbitrary reward/penalty scores. Seedtop now has gilist support.


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A static analysis automation framework.


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A fully-featured launchd front-end for managing and debugging system and user services.