30 November 2007
The SIBsim4 project is based on sim4, which is a program designed to align an expressed DNA sequence with a genomic sequence, allowing for introns. SIBsim4 is an extensive rewrite of the sim4 program to improve execution speed and provide more informative output.
Release Notes: This release fixes excessive run-time in some cases of partially repeated sequences. All users are encouraged to update.
VLC media player is a media player, streamer, and encoder for Unix, Windows, Mac OS X, BeOS, QNX, and PocketPC. It can play from many inputs like files, network streams, capture device, desktops, or DVD, SVCD, VCD, and audio CD. It can play most audio and video codecs (MPEG 1/2/4, H264, VC-1, DivX, WMV, Vorbis, AC3, AAC, etc.), but can also convert to different formats and/or send streams through the network.
Release Notes: This version is aimed at fixing security vulnerabilities in the ActiveX plugin and the FLAC library that affect VLC media player 0.8.6c and lower. Improvements include better video output compatibility on Mac OS X, and Apple Remote support on Mac OS X 10.5 Leopard.
pyAwale is a pure Python implementation of the Ivory Coast rules for Awale. Awale is a game of great antiquity, and has been played around the world in various forms for millenia. It is a member of the mancala family of board games.
Release Notes: This release improves the user interface (use return key instead of a click on the end panel to restart a new party and display count of seeds when more than 8), and adds a script to replay a party from traces/logs.
Sylbi is a conversation system that is not a forum and not a blogging platform, but a combination of the two. It grew from the idea that a blog with comments and a forum only differ in their perspective of the conversation. Both provide a chronological set of postings, initiated by someone, and, (potentially) replied to by others. The main difference is the perspective they present: a blog presents the perspective of the blog owner(s), while a forum presents the perspective of the forum and a topic defined in the forum. Sylbi allows you to look at conversations either way.
Release Notes: This release fixed a bug in conversation recategorization. It adds tracing via 'carp' that can be enabled/disabled by the user.
iodine lets you tunnel IPv4 data through a DNS server. This can be useful in situations where Internet access is firewalled, but DNS queries are allowed. It needs a TUN/TAP device to operate. The bandwidth is asymmetrical with limited upstream and up to 1 Mbit/s downstream.
Release Notes: The server crash on received NULL queries for incorrect domains was fixed. Any DNS error codes are now printed in the client for easier troubleshooting. The password is now hidden, and the nameserver will default to the one in /etc/resolv.conf.
Algernon is a subsumption architecture built on top of Simbad. It includes a maze-solving program as an illustration of how it can be used.
Release Notes:
clker.com openoffice addon is an add-on extension to OpenOffice.org that allows the access of clker.com clipart, viewing the collection selected on the Web site and saved in the user's clipart basket, and copying clip art directly to the clipboard to paste into text documents, presentations, or spreadsheets.
Release Notes:
This is a set of MySQL UDFs (user defined functions) to work with memcached using libmemcached. With these functions, you can get, set, append, prepend, delete, increment, and decrement objects in memcached, provide statistics, and set which servers to use and which behavior the server connections will use. These functions can be combined with MySQL triggers. You can also use memcached as a global sequence generator for MySQL by making use of the increment function. These functions are compatible with all versions of MySQL.
Release Notes:
ROX-Filer is a fast and powerful graphical file manager. It has full drag-and-drop support and background file operations, and is highly configurable. It can also act as a pinboard, allowing you to pin frequently used files to the desktop background.
Release Notes: The panel configuration interface has been reworked to allow for easier adding, removing, and editing of panels. A new log window records file actions for reference. Support for using GNOME icon themes was improved. The source code is now managed using GIT. Various bugs were fixed.
The Mars Simulation Project is an open source Java project to create a simulation of a future human settlement on the planet Mars.
Release Notes: This release adds parts for repair/maintenance and automatically loading/saving UI settings.
pam_krb5_migrate is a stackable authentication module that takes a username and password from an earlier module in the stack and attempts to transparently add the user to a Kerberos realm using the Kerberos 5 kadmin service. The module can be used to ease the administrative burdens of migrating a large installed userbase from pre-existing authentication methods to a Kerberos-based setup.
Release Notes: This release fixes compatibility with newer versions of Heimdal.
Extrema, originally developed in the fields of nuclear and particle physics, is a powerful visualization and data analysis tool that enables researchers to quickly distill their large, complex data sets into meaningful information. Its flexibility, sophistication, and power allow you to easily develop your own commands and create highly customized graphs.
Release Notes: More polar plot characteristics were added: POLARAXISANGLE, POLARAXISLINEWIDTH, POLARCLOCKWISE, and POLARCOMPASSLABELS. The GRAPH\POLAR and GRAPH\RADAR commands were modified. GRAPH\RADAR draws a polar plot with POLARAXISANGLE set to 90, POLARCLOCKWISE set to 1, and POLARCOMPASSLABELS set to 1. The help files were updated.
expect-lite is an quick and easy command line automation tool. Written in expect, it is designed to directly map an interactive terminal session into an automation script. expect-lite scripts use special character(s) at the beginning of each line to indicate the action. Basic expect-lite scripts can be created by simply cutting and pasting text from a terminal window into a script, and adding '>' '<' characters. No knowledge of expect is required. Expect-lite is targeted at the verification testing environment, and will produce a Pass/Fail result at the end of the script. However, its use is not limited to this environment. It includes a powerful debugger with breakpoints, step/skip, and the ability to copy/paste expect-lite lines right into a running script.
Release Notes: This release fixes bug #1839620 (dynamic variables only support "$ " prompt). It specifically adds "% " to the list of prompts. The documentation has been updated regarding prompt detection.
R2d2 is an efficient multi-threaded RFC1939-compliant POP3 server intended for use with a MySQL-based accounts database and Maildir-based maildrops.
Release Notes: TLS support has been added. Both the STLS POP3 extension capability and POP-SSL on a separate port are supported.
PSI (PHP Simple Informer) is a very simple network services monitoring application written in PHP. It can be run as a command-line application (PHP compiled as CGI is required) or as a Web PHP file.
Release Notes: This release fixes a bug that prevented succesful connection to lighttpd Web servers.
Photo Organizer is a Web-based multi-user photo management tool that was designed for professional photographers. It offers a searchable photo database that supports photo version control, a datebook with client management, photo submission history, EXIF, IPTC, XML, and XMP, user quotas, and printing labels and color brochures. It uses ImageMagick and DCRAW to handle over a hundred image formats, and relies on PostgreSQL as its database backend.
Release Notes: This release fixes several bugs. Installations on some PostgreSQL 8.0 systems were failing, and the test to limit repository volume sizes was incorrect, causing volumes to grow without bound.
Java ReStructuredText is a parser and converter. It can parse ReStructuredText and generate XHTML, xdoc, and DocBook, or you can use your own XSL file.
Release Notes: This release provides restructured text parsing improvements, new markup detection, and many bugfixes.
check_tcptraffic is a simple Nagios plugin to monitor network traffic on Linux systems.
Release Notes: A major rewrite that is compatible with embedded Perl and uses the Nagios::Plugin CPAN modules.
Perfect Match (pmatch) is a small and fast commandline utility for finding duplicate files.
Release Notes:
RPL/2 (Reverse Polish Lisp/2) is a langage derived from the RPL made by Hewlett-Packard for its HP-28S. It has some extensions (preprocessor, compilated libraries, new functions), a TeX output, and can draw graphics.
Release Notes: This release adds EXGET, OBGET, EXSUB, and OBSUR. Bugs have been fixed in WAIT, SPLASH, and DETACH. Process management has been rewritten and fixed. WFPROC, WFDATA, RETURN, HALT, and FLOW have been rewritten. Socket support (which requires OPEN modifications) has been added (TCP/UDP/Unix, IPV4/IPV6). External libraries support has been modified (see rplexternals.h). The symbol names exported in librpl have been modified. A memory leak and a minor bug have been fixed in analyse_algebrique(). The license is now CeCILL, a GPL-compliant license.
white_dune is a graphical VRML97/X3DV editor, simple NURBS/Superformula 3D modeller, animation tool, and VRML97/X3DV commandline compiler in development. VRML97 (Virtual Reality Modeling Language) is the ISO standard for displaying 3D data over the Web via browser plugins ("HTML for realtime 3D"). X3DV is the direct successor of VRML97. VRML97 and X3DV have support for animation, real-time interaction, and multimedia (images, movies, and sounds). white_dune can read, create, and display VRML97/X3DV files and let the user change the scenegraph/fields. It also has support for stereoscopic view via "quadbuffer"-capable stereo visuals, and support for 3D input devices like a joystick, spaceball, or magnetic tracker.
Release Notes: This release adds selection of RigidBody nodes when clicking to a child of a RigidBodyCollection node in the 3D preview window. It modifies the handle draw of ProximitySensor and CattExportSrc to be visible both with and without depthtest.
GRASS (the Geographic Resources Analysis Support System) is a software raster- and vector-based GIS (Geographic Information System), image processing system, graphics production system, and spatial modeling system. It contains many modules for raster data manipulation, vector data manipulation, rendering images on the monitor or paper, multispectral image geocoding and processing, point data management and general data management. It also has tools for interfacing with digitizers, scanners, and the PostgreSQL, DBF, and ODBC connected databases. GRASS operates on all common operating systems.
Release Notes: This release adds further maturation of the GRASS 6 GUI, vector, and database code. Some improvements have been backported from the GRASS 6.3 development branch, in which new development continues at a strong pace of approximately one code commit every hour, including major work on a new cross-platform wxPython GUI and a native MS Windows port.
LibLZF is a very small, self-contained library that can be incorporated into applications where data compression would be nice but speed is more important. It can be used to add data compression in a painless way to any program. Likewise, a small and self-contained perl interface is available via CPAN (Compress::LZF).
Release Notes: The license has been changed to a two-clause BSD license with the option to switch to GPL version 2 or any later version. The compression speed has been increased considerably, and the user can now chose between roughly the same speed as fastlz with a better compression ratio, or a faster speed than fastlz at a slightly worse compression ratio. The lzf utility has been improved to act much more like other similar utilities (e.g. gzip).
Observium is an autodiscovering network monitoring system focused primarily on Cisco and Linux networks but includes support for a wide range of network hardware and operating systems. Observium has grown out of a lack of easy to use NMSes. It is intended to provide a more navigable interface to the health and performance of your network. Its design goals include collecting as much historical data about devices as possible, being completely autodiscovered with little or no manual intervention, and having a very intuitive interface.
Release Notes: This release improves the data collection and graph generation code, slightly improves the Commandline interfaces and error condition handling, and adds many cosmetic changes and fixes and PHP5 compatibility.